New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3934402	59 (1.140)	4 (0.080)	3/248	NT	6.3%	coding (1011/1911 nt)	PP_3467	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 3934434	63 (1.280)					coding (979/1911 nt)	PP_3467	sigma‑54 dependent transcriptional regulator

GACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAACGTTCGCC  >  NC_002947/3934291‑3934581                                                                                                                                                |                                                                                                                                                     gACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCGAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccg                                                                                                                                                 >  4:249942‑M2/1‑144 (MQ=255)   ccACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGc                                                                                                                                              >  6:82428/1‑149 (MQ=255)              ccGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATg                                                                                                                                    <  2:67161/148‑1 (MQ=255)               cGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGgt                                                                                                                                  <  2:39733/149‑1 (MQ=255)                   aCCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGc                                                                                                                              >  2:119127/1‑149 (MQ=255)                      ggTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                                                           <  7:190265/149‑1 (MQ=255)                        tttCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgggg                                                                                                                         <  5:32367/149‑1 (MQ=255)                        gttCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGGAGGTGGCGCGCCAGGCGTTGATCACCTCCGGCCAGACCATCGAGTGCAGGCGACTGTTGGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgggg                                                                                                                         <  6:270927/148‑1 (MQ=255)                          tCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTggggg                                                                                                                        <  8:263820/148‑1 (MQ=255)                              ccAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGGGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTAcc                                                                                                                   >  1:300851/1‑149 (MQ=255)                              ccAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGCCTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTAcc                                                                                                                   >  8:55929/1‑149 (MQ=255)                                agcagcagcACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCg                                                                                                                 >  4:41565/1‑149 (MQ=255)                                    gcagcaCTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCa                                                                                                             >  2:15719/1‑149 (MQ=255)                                     cagcaCTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCAt                                                                                                            >  1:311994/1‑149 (MQ=255)                                          cTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGgcgc                                                                                                       <  3:101657/149‑1 (MQ=255)                                          cTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGgcgc                                                                                                       <  6:300955/149‑1 (MQ=255)                                             gCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGGTCAA‑GGCCGGCTGGCTGGATGGTGTGCTGGGGTTTACCGGGCCGTGGggcg                                                                                                      >  8:123449/1‑147 (MQ=255)                                             gCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCgg                                                                                                     <  1:324724/148‑1 (MQ=255)                                             gCAAACCATTGCCCAGCCCCTGGCGAGCCATCCGCAGGTTGCGCGCCACGGCTTGCTCACCACCGGCCAGAGCATCGAGTCCAGGCGACTCTTTGCTCAA‑GGCCGGCTTGCTGCATGGTGTGCTCGGGGTTACCAGGCCATGGCGCgg                                                                                                     >  5:322667/1‑148 (MQ=255)                                                aaCCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCaa                                                                                                                                                      <  2:197518/97‑1 (MQ=255)                                                aaCCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCaa                                                                                                                                                      >  1:197518/1‑97 (MQ=255)                                                aaCCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAACGGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAg                                                                                                  <  1:82335/149‑1 (MQ=255)                                                    aTTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTTCTGGGGGTTACCCGGCCATGGCGCGGCAGCTg                                                                                               >  8:153092/1‑147 (MQ=255)                                                        cccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGgcgc                                                                                                       >  1:208763/1‑135 (MQ=255)                                                        cccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGgcgc                                                                                                       <  2:208763/135‑1 (MQ=255)                                                        cccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAggg                                                                                          >  5:295892/1‑148 (MQ=255)                                                         ccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCa                                                                                        >  2:313168/1‑149 (MQ=255)                                                         ccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCa                                                                                        >  4:23535/1‑149 (MQ=255)                                                          cAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCAc                                                                                       <  3:41565/149‑1 (MQ=255)                                                           aGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGc                                                                                                    >  8:167740/1‑135 (MQ=255)                                                           aGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGc                                                                                                    <  7:167740/135‑1 (MQ=255)                                                           aGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACg                                                                                      >  8:44186/1‑149 (MQ=255)                                                                cTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                                                           <  7:246794/107‑1 (MQ=255)                                                                cTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                                                           >  8:246794/1‑107 (MQ=255)                                                                cTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGaaa                                                                                  >  3:293906/1‑148 (MQ=255)                                                                 tGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                                                           <  6:135855/106‑1 (MQ=255)                                                                 tGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                                                           >  5:135855/1‑106 (MQ=255)                                                                   gCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGTGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATa                                                                                <  5:228131/147‑1 (MQ=255)                                                                       gCCAGGGGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACt                                                                           <  2:78151/148‑1 (MQ=255)                                                                                       gcgcCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTg                                                           >  2:140737/1‑148 (MQ=255)                                                                                       gcgcCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGc                                                          <  1:119127/149‑1 (MQ=255)                                                                                        cgcCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCa                                                         <  3:23535/149‑1 (MQ=255)                                                                                         gcCAGGCGTTGATCACATCCGGCCAGAGCATCGAGTGCAGGCGACAGTTTCCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCAGGGAAATAGAACTCGCCCTTGGCGGTCTGCAc                                                        >  1:57112/1‑149 (MQ=255)                                                                                              gCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACgctgc                                                   <  2:300851/149‑1 (MQ=255)                                                                                                 ttGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGa                                                <  5:82428/149‑1 (MQ=255)                                                                                                   gATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGAc                                               <  6:295892/148‑1 (MQ=255)                                                                                                         cTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccggaggtgatcaacgcctggcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgccagtgctgctgctgggcgaaaccggtaccggcaaggaagtg                                         <  5:72287‑M2/149‑110 (MQ=255)                                                                                                         cTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccggaggtgatcaacgcctggcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgccagtgctgctgctgggcgaaaccgg                                                         >  2:326093‑M2/1‑40 (MQ=255)                                                                                                         cTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccggaggtgatcaacgcctggcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgccagtgctgctgctgggcgaaaccgg                                                         <  1:326093‑M2/133‑94 (MQ=255)                                                                                                         cTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGccc                                        >  6:88848/1‑149 (MQ=255)                                                                                                          tCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccggaggtgatcaacgcctggcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgccagtgctgctgctgggcgaaaccggtaccggcaaggaagtgg                                        <  1:257553‑M2/149‑111 (MQ=255)                                                                                                          tCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCt                                       >  8:81189/1‑149 (MQ=255)                                                                                                            cGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACgctgct                                                  <  5:19919/136‑1 (MQ=255)                                                                                                            cGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACgctgct                                                  >  6:19919/1‑136 (MQ=255)                                                                                                            cGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCt                                       <  1:15719/147‑1 (MQ=255)                                                                                                               ccAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCca                                   >  7:238734/1‑148 (MQ=255)                                                                                                                cAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCca                                   >  2:269806/1‑147 (MQ=255)                                                                                                                     cATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGgcga                            <  8:238734/149‑1 (MQ=255)                                                                                                                      aTCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGTGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGgcga                            <  7:153092/148‑1 (MQ=255)                                                                                                                         gAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTTCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCTGTCTGCACGCTGCTGACCCCGCCCTGCCACAGgcgagcga                        <  8:268169/149‑1 (MQ=255)                                                                                                                         gAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGccc                                        >  1:244409/1‑133 (MQ=255)                                                                                                                         gAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGccc                                        <  2:244409/133‑1 (MQ=255)                                                                                                                          aGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGAt                       <  1:140737/149‑1 (MQ=255)                                                                                                                                 gCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGcc                >  3:258140/1‑149 (MQ=255)                                                                                                                                   gACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCgg              <  4:258140/149‑1 (MQ=255)                                                                                                                                   gACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCgg              >  3:296948/1‑149 (MQ=255)                                                                                                                                      tGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCgggg            >  1:116607/1‑148 (MQ=255)                                                                                                                                        tttGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAAc         >  2:256682/1‑149 (MQ=255)                                                                                                                                        tttGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAAc         >  3:126018/1‑149 (MQ=255)                                                                                                                                           gCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAACGtt      >  7:255191/1‑149 (MQ=255)                                                                                                                                           gCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAACGt       <  4:293906/148‑1 (MQ=255)                                                                                                                                            cTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAACGtt      <  2:311994/148‑1 (MQ=255)                                                                                                                                            cTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAACGTTc     <  1:79115/149‑1 (MQ=255)                                                                                                                                            cTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAACGTTc     >  6:198030/1‑149 (MQ=255)                                                                                                                                             tCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAACGTTCg    >  4:175606/1‑149 (MQ=255)                                                                                                                                               aa‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAACGTTCGcc  >  1:209210/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                     GACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCACAGGCGAGCGATAAAGGCCGGGGAACGTTCGCC  >  NC_002947/3934291‑3934581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.