New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4136428	46 (0.890)	4 (0.080)	4/252	NT	8.5%	coding (637/921 nt)	PP_3640	AraC family transcriptional regulator
	?	NC_002947	= 4136464	42 (0.840)					coding (673/921 nt)	PP_3640	AraC family transcriptional regulator

CAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGC  >  NC_002947/4136281‑4136576                                                                                                                                                    |                                                                                                                                                     caGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCggg                                                                                                                                                     <  7:223638/149‑1 (MQ=255)  aGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCgggg                                                                                                                                                    >  3:256752/1‑149 (MQ=255)       cTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAAc                                                                                                                                               <  3:285906/149‑1 (MQ=255)         aCTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCt                                                                                                                                             >  1:139538/1‑149 (MQ=255)          cTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTg                                                                                                                                            >  1:294925/1‑149 (MQ=255)              aaCGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGtgcaagcggccatg                                                                                                                                        >  5:119222‑M1/1‑135 (MQ=255)                 ggCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATg                                                                                                                                     <  4:256752/149‑1 (MQ=255)                        gCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACa                                                                                                                              >  4:166467/1‑149 (MQ=255)                          aCTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAAc                                                                                                                                               <  5:48137/130‑1 (MQ=255)                          aCTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAAc                                                                                                                                               >  6:48137/1‑130 (MQ=255)                          aCTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATg                                                                                                                            <  7:7945/149‑1 (MQ=255)                          aCTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATg                                                                                                                            <  7:92752/149‑1 (MQ=255)                           cTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATgg                                                                                                                           <  6:201636/149‑1 (MQ=255)                                tgttCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGc                                                                                                                       <  7:58335/148‑1 (MQ=255)                                    ccTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGaa                                                                                                                                <  4:55839/135‑1 (MQ=255)                                    ccTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCa                                                                                                                  >  8:242393/1‑149 (MQ=255)                                     cTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCAc                                                                                                                 <  6:202622‑M2/149‑2 (MQ=255)                                          cGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGtgcaagcggccatgttctccatggtccaggtttgccccggat                                                                                                            <  6:119222‑M1/149‑43 (MQ=255)                                            tgctgcGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTg                                                                                                          <  8:226914/149‑1 (MQ=255)                                                 cgcCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACg                                                                                                     <  4:172911/149‑1 (MQ=255)                                                 cgcCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACg                                                                                                     <  2:294925/149‑1 (MQ=255)                                                 cgcCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACg                                                                                                     >  8:280890/1‑149 (MQ=255)                                                  gcCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACgg                                                                                                    <  7:242393/149‑1 (MQ=255)                                                            gCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCggg                                                                                                                                                     >  2:162941/1‑90 (MQ=255)                                                            gCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCggg                                                                                                                                                     <  1:162941/90‑1 (MQ=255)                                                             cACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCtttttt                                                                                         >  5:290549/1‑149 (MQ=255)                                                               cGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCa                                                                                       <  7:280890/149‑1 (MQ=255)                                                                gCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTc                                                                                        >  5:129660/1‑147 (MQ=255)                                                                gCAGGGCAATCGCTGGGCGGGCGGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCaa                                                                                      <  5:103140/149‑1 (MQ=255)                                                                           gCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGc                                                                            <  3:166467/148‑1 (MQ=255)                                                                                     cTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCgg                                                                 <  5:202622/149‑1 (MQ=255)                                                                                            ccctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCa                                                          >  3:203656/1‑149 (MQ=255)                                                                                             cctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCTGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCg                                                                           >  2:160478/1‑131 (MQ=255)                                                                                             cctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCTGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCg                                                                           <  1:160478/131‑1 (MQ=255)                                                                                             cctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCAc                                                         >  6:146743/1‑149 (MQ=255)                                                                                             cctcgcacGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGTATCCGGtgcaagcggccatgttctccatggtccaggtttgccccgga                                                                                                             <  1:73656‑M1/97‑42 (MQ=255)                                                                                             cctcgcacGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGtgcaagcggccatgttctccatggtccaggtttgccccgga                                                                                                             >  2:73656‑M1/1‑56 (MQ=255)                                                                                                cgcccgccAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCgg                                                      <  4:203656/149‑1 (MQ=255)                                                                                                   ccgccAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGa                                                    >  6:273439/1‑148 (MQ=255)                                                                                                        aGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGtg                                              <  5:146743/149‑1 (MQ=255)                                                                                                           cGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGtgctg                                           >  3:37557/1‑149 (MQ=255)                                                                                                                    ccGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCt                                   <  4:37557/148‑1 (MQ=255)                                                                                                                     cGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCa                                                                              <  4:170714/104‑1 (MQ=255)                                                                                                                     cGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTATCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTgc                                 <  5:14463/149‑1 (MQ=255)                                                                                                                            cTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATgc                           <  6:312855/148‑1 (MQ=255)                                                                                                                             ttGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATgcgc                         >  7:186535/1‑149 (MQ=255)                                                                                                                                aGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTgctgct                                         >  8:74335/1‑130 (MQ=255)                                                                                                                                aGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTgctgct                                         <  7:74335/130‑1 (MQ=255)                                                                                                                                   aaTTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAAAATGGCCGCTTGCACCGGGTTCTCACGGTCGGCTTTTTTCAAGCGta                                                                                 >  5:162059/1‑86 (MQ=255)                                                                                                                                         tCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGccagccag             >  4:195673/1‑149 (MQ=255)                                                                                                                                              cATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGtgctg                                           <  2:90537/114‑1 (MQ=255)                                                                                                                                              cATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGtgctg                                           >  1:90537/1‑114 (MQ=255)                                                                                                                                              cATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTtgct        <  4:319716/149‑1 (MQ=255)                                                                                                                                               aTCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCAccggatgctcgatcaattgctcaagcaatccggcaaatgccggctggcgggcgagggcgaccagcccgcccagcgattgccctgcgtgcacctgctggcgcagcacg       <  6:119222‑M2/149‑108 (MQ=255)                                                                                                                                               aTCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgcca                  >  5:210826/1‑138 (MQ=255)                                                                                                                                               aTCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgcca                  <  6:210826/138‑1 (MQ=255)                                                                                                                                                tCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCAccggatgctcgatcaattgctcaagcaatccggcaaatgccggctggcgtgcgagg                                                          >  2:73656‑M2/1‑41 (MQ=255)                                                                                                                                                tCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCAccggatactcgatcaattgctcaagcaatccggcaaatgccggctggcgtgcgagg                                                          <  1:73656‑M2/97‑57 (MQ=255)                                                                                                                                                tCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTtgctg       >  8:146576/1‑148 (MQ=255)                                                                                                                                                    gtgcaagcggccatgttctccatggtccaggtttgccccggatgctcgatcaattgctcaagcaatccggcaaatgccggctggcgggcgagggcgaccagcccgcccagcgattgccctgcgtgcacctgctggcgcagcacgtacag  <  6:202622‑M1/149‑149 (MQ=255)                                                                                                                                                    gggCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGc  >  7:18762/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGC  >  NC_002947/4136281‑4136576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.