New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5487779	50 (0.970)	3 (0.060)	3/246	NT	5.5%	coding (1108/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 5487836	55 (1.130)					coding (1165/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator

CTGTTCAGCCTGGCCATGGTGGTGTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCAT  >  NC_002947/5487632‑5487927                                                                                                                                                    |                                                                                                                                                     cTGTTCAGCCTGGCCATGGTGGTGTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGt                                                                                                                                                     >  2:243598/1‑149 (MQ=255)  tGTTCAGACTGGCCATGGTGGTGTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTCACCCTGCTCAGTGGCCTGCTCCTCTACCTGGCGGt                                                                                                                                                     >  8:250165/1‑148 (MQ=255)   gTTCAGCCTGGCCATGGTGGTGTTCAACCT‑GGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAg                                                                                                                                                  >  8:127889/1‑149 (MQ=255)    ttCAGCCTGGCCATGGTGGTGTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCa                                                                                                                                                   <  8:93585/148‑1 (MQ=255)    ttCAGCCTGGCCATGGTGGTGTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCa                                                                                                                                                   <  2:233669/148‑1 (MQ=255)               cATGGTGGTGTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTgc                                                                                                                                       >  6:271128/1‑149 (MQ=255)                aTGGTGGTGTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTgcg                                                                                                                                      >  2:318974/1‑149 (MQ=255)                   gtggtgTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTgcggc                                                                                                                                    <  8:45176/148‑1 (MQ=255)                    tggtgTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTgcggcg                                                                                                                                   >  2:35926/1‑148 (MQ=255)                    tggtgTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGgcgc                                                                                                                                  <  2:199503/149‑1 (MQ=255)                        gtTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCAt                                                                                                                                >  3:140117/1‑147 (MQ=255)                         ttCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATaa                                                                                                                              <  1:35926/148‑1 (MQ=255)                          tCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGc                                                                                                                            >  3:222400/1‑149 (MQ=255)                           cAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGc                                                                                                                            >  6:22323/1‑148 (MQ=255)                             aCCTCGGAGGCCTGGGACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCgag                                                                                                                         <  5:268478/149‑1 (MQ=255)                              ccTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCgag                                                                                                                         >  3:199985/1‑148 (MQ=255)                                  ggAGGCCTGGTACTGCTGCCAGCCCTGCTGGGGCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCgaggag                                                                                                                      <  7:250165/147‑1 (MQ=255)                                     ggCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGttt                                                                                                                 <  1:243598/149‑1 (MQ=255)                                           gTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAgcgc                                                                                                           <  8:260963/149‑1 (MQ=255)                                                    ccAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTg                                                                                                   <  4:199985/148‑1 (MQ=255)                                                      aGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGccagtgcacggctggcgctgaaacgctcctcgcttatgcgccgcagccgttcac                                                                                                <  1:285556‑M1/149‑55 (MQ=255)                                                           tgctgGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGAGTTTCAGCGCCAGCCGTGCACTGGcc                                                                                           <  7:138179‑M2/149‑3 (MQ=255)                                                              cgggcCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgc                                                                                         <  6:296730‑M2/147‑5 (MQ=255)                                                               gggCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgc                                                                                         <  2:227347‑M2/147‑5 (MQ=255)                                                                ggCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgccag                                                                                      >  5:22323‑M2/1‑142 (MQ=255)                                                                ggCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgccag                                                                                      >  1:318974‑M2/1‑142 (MQ=255)                                                                  ccTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGccagtgcacggctggcgctgaaacgctcctcgcttatgcgccgcagccgttcactgacc                                                                                           <  3:318292‑M1/142‑60 (MQ=255)                                                                  ccTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGccagtgcacggctggcgctgaaacgctcctcgcttatgcgccgcagccgttcactgacc                                                                                           >  4:318292‑M1/1‑83 (MQ=255)                                                                   cTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGa                                                                                   >  8:76106/1‑149 (MQ=255)                                                                        acGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCg                                                                               >  1:236245/1‑148 (MQ=255)                                                                        acGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCg                                                                               >  8:14971/1‑148 (MQ=255)                                                                          gCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCTTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATTCGGa                                                                             >  7:162560/1‑148 (MQ=255)                                                                          gCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGa                                                                             >  7:235473/1‑148 (MQ=255)                                                                          gCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGa                                                                             >  1:211473/1‑148 (MQ=255)                                                                            aCCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGaaa                                                                           >  8:96611/1‑148 (MQ=255)                                                                                 gACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAAc                                                                      <  6:282382/148‑1 (MQ=255)                                                                                      ccTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCaaa                                                                <  2:236245/149‑1 (MQ=255)                                                                                      ccTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCaaa                                                                <  5:271128/149‑1 (MQ=255)                                                                                      ccTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCa                                                                  >  5:201267/1‑147 (MQ=255)                                                                                          gctgctGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGcc                                                             <  2:211473/148‑1 (MQ=255)                                                                                                 tgtATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCt                                                     <  7:14971/149‑1 (MQ=255)                                                                                                   tATCCTGCTGGGCCTGACCTTGGTCAGTGGCCTGCTCCTCAACCTGGCGTTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTg                                                    <  8:162560/148‑1 (MQ=255)                                                                                                    aTCCTGCTGGGCCTGACCGTGGTCAGTGGACTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGc                                                  >  1:191684/1‑149 (MQ=255)                                                                                                     tCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGcc                                                 <  5:296730/149‑1 (MQ=255)                                                                                                     tCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGc                                                  >  8:212475/1‑148 (MQ=255)                                                                                                       ctgctgGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCaa                                               <  4:140117/149‑1 (MQ=255)                                                                                                       ctgctgGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCaa                                               <  7:127889/149‑1 (MQ=255)                                                                                                               ccTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGc                                        >  6:308158/1‑148 (MQ=255)                                                                                                                 tGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCAc                                     >  7:252714/1‑149 (MQ=255)                                                                                                                   acagtgtTCAGTTGCCTGCGCCTCAACCTGGCTGGCAGTGAACGGGTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCAc                                     <  8:138179/144‑1 (MQ=255)                                                                                                                       tGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCTACGAAATc                               <  1:227347/149‑1 (MQ=255)                                                                                                                       tGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATc                               <  6:201267/149‑1 (MQ=255)                                                                                                                              tGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCa                                          >  8:209724/1‑131 (MQ=255)                                                                                                                              tGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCa                                          <  7:209724/131‑1 (MQ=255)                                                                                                                                 ccTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGa                     >  6:6667/1‑149 (MQ=255)                                                                                                                                    gCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATg                   >  4:312671/1‑148 (MQ=255)                                                                                                                                       cctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTg                                                    <  5:128139/112‑1 (MQ=255)                                                                                                                                       cctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTg                                                    >  6:128139/1‑112 (MQ=255)                                                                                                                                       cctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATGAACg               >  5:167385/1‑149 (MQ=255)                                                                                                                                        ctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATGAACgg              >  8:153991/1‑149 (MQ=255)                                                                                                                                        ctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATGAACg               <  3:312671/148‑1 (MQ=255)                                                                                                                                             ccTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTg          >  2:82636/1‑148 (MQ=255)                                                                                                                                             ccTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGc         >  6:21156/1‑149 (MQ=255)                                                                                                                                              cTGGCGGccagtgcacggctggcgctgaaacgctcctcgcttatgcgccgcagccgttcactgaccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcaggcc        >  1:318974‑M1/1‑7 (MQ=255)                                                                                                                                              cTGGCGGccagtgcacggctggcgctgaaacgctcctcgcttatgcgccgcagccgttcactgaccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcaggcc        >  5:22323‑M1/1‑7 (MQ=255)                                                                                                                                                 gcggccagtgcacggctggcgctgaaacgctcctcgcttatgcgccgcagccgttcactgaccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcaggcccg      <  6:296730‑M1/148‑145 (MQ=255)                                                                                                                                                 gcggccagtgcacggctggcgctgaaacgctcctcgcttatgcgccgcagccgttcactgaccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcaggccc       <  2:227347‑M1/147‑144 (MQ=255)                                                                                                                                                   ggccagtgcacggctggcgctgaaactctcctcgcttatgcgccgcagccgttcactgaccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcaggcccagca   <  7:138179‑M1/149‑148 (MQ=255)                                                                                                                                                   ggTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcagg          <  3:318292‑M2/142‑84 (MQ=255)                                                                                                                                                   ggTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcagg          >  4:318292‑M2/1‑59 (MQ=255)                                                                                                                                                    gTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCAt  >  2:194534/1‑149 (MQ=255)                                                                                                                                                    gTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCAt  >  4:97518/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CTGTTCAGCCTGGCCATGGTGGTGTTCAACCTCGGAGGCCTGGTACTGCTGCCAGCCCTGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCAT  >  NC_002947/5487632‑5487927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.