New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5487779	50 (0.970)	3 (0.060)	3/246	NT	5.5%	coding (1108/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 5487836	55 (1.130)					coding (1165/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator

TGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGTGAAGCAACGTGATTATGTGCAGAC  >  NC_002947/5487690‑5487984                                                                                                                                                   |                                                                                                                                                      tgctgGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGAGTTTCAGCGCCAGCCGTGCACTGGcc                                                                                                                                                     <  7:138179‑M2/149‑3 (MQ=255)    cgggcCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgc                                                                                                                                                   <  6:296730‑M2/147‑5 (MQ=255)     gggCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgc                                                                                                                                                   <  2:227347‑M2/147‑5 (MQ=255)      ggCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgccag                                                                                                                                                >  5:22323‑M2/1‑142 (MQ=255)      ggCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgccag                                                                                                                                                >  1:318974‑M2/1‑142 (MQ=255)         cTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGa                                                                                                                                             >  8:76106/1‑149 (MQ=255)              acGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCg                                                                                                                                         >  1:236245/1‑148 (MQ=255)              acGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCg                                                                                                                                         >  8:14971/1‑148 (MQ=255)                gCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCTTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATTCGGa                                                                                                                                       >  7:162560/1‑148 (MQ=255)                gCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGa                                                                                                                                       >  1:211473/1‑148 (MQ=255)                gCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGa                                                                                                                                       >  7:235473/1‑148 (MQ=255)                  aCCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGaaa                                                                                                                                     >  8:96611/1‑148 (MQ=255)                       gACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAAc                                                                                                                                <  6:282382/148‑1 (MQ=255)                            ccTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCaaa                                                                                                                          <  5:271128/149‑1 (MQ=255)                            ccTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCaaa                                                                                                                          <  2:236245/149‑1 (MQ=255)                            ccTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCa                                                                                                                            >  5:201267/1‑147 (MQ=255)                                gctgctGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGcc                                                                                                                       <  2:211473/148‑1 (MQ=255)                                       tgtATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCt                                                                                                               <  7:14971/149‑1 (MQ=255)                                         tATCCTGCTGGGCCTGACCTTGGTCAGTGGCCTGCTCCTCAACCTGGCGTTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTg                                                                                                              <  8:162560/148‑1 (MQ=255)                                          aTCCTGCTGGGCCTGACCGTGGTCAGTGGACTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑c                                                                                                           >  1:191684/1‑149 (MQ=255)                                           tCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑cc                                                                                                          <  5:296730/149‑1 (MQ=255)                                           tCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑c                                                                                                           >  8:212475/1‑148 (MQ=255)                                             ctgctgGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCaa                                                                                                        <  4:140117/149‑1 (MQ=255)                                             ctgctgGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCaa                                                                                                        <  7:127889/149‑1 (MQ=255)                                                     ccTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGc                                                                                                 >  6:308158/1‑148 (MQ=255)                                                       tGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCAc                                                                                              >  7:252714/1‑149 (MQ=255)                                                         acagtgtTCAGTTGCCTGCGCCTCAACCTGGCTGGCAGTGAACGGGTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCAc                                                                                              <  8:138179/144‑1 (MQ=255)                                                             tGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCTACGAAATc                                                                                        <  1:227347/149‑1 (MQ=255)                                                             tGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATc                                                                                        <  6:201267/149‑1 (MQ=255)                                                                    tGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCa                                                                                                   >  8:209724/1‑131 (MQ=255)                                                                    tGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCa                                                                                                   <  7:209724/131‑1 (MQ=255)                                                                       ccTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGa                                                                              >  6:6667/1‑149 (MQ=255)                                                                          gCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATg                                                                            >  4:312671/1‑148 (MQ=255)                                                                             cctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTg                                                                                                              >  6:128139/1‑112 (MQ=255)                                                                             cctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTg                                                                                                              <  5:128139/112‑1 (MQ=255)                                                                             cctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACg                                                                        >  5:167385/1‑149 (MQ=255)                                                                              ctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACgg                                                                       >  8:153991/1‑149 (MQ=255)                                                                              ctcAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACg                                                                        <  3:312671/148‑1 (MQ=255)                                                                                   ccTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTg                                                                   >  2:82636/1‑148 (MQ=255)                                                                                   ccTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGc                                                                  >  6:21156/1‑149 (MQ=255)                                                                                         ggTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcagg                                                                    >  4:318292‑M2/1‑59 (MQ=255)                                                                                         ggTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcagg                                                                    <  3:318292‑M2/142‑84 (MQ=255)                                                                                          gTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCAt                                                           >  4:97518/1‑149 (MQ=255)                                                                                          gTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCAt                                                           >  2:194534/1‑149 (MQ=255)                                                                                             aGTGTACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCTCCAGCCGTTCACTGGCCGCCAGCGATTCGGAAATCAACGCCAAAGCCGAGTTTCTGGCCCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGa                                                         <  1:82636/149‑1 (MQ=39)                                                                                             aGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGa                                                         <  5:21156/148‑1 (MQ=255)                                                                                              gTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGccgccaggttgaggagcaggccactgaccacggtcaggcccagcaggatacacagcagccagggtgtcgaggtgcgtgtcaggcccagcagggct                                                        <  1:285556‑M2/149‑96 (MQ=255)                                                                                              gTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACt                                                       <  7:153991/149‑1 (MQ=255)                                                                                                 aaCGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGaa                                                    <  2:191684/149‑1 (MQ=255)                                                                                                            cgcATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCATGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGGTggg                                         <  7:212475/149‑1 (MQ=255)                                                                                                              cATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGca                                       <  5:308158/149‑1 (MQ=255)                                                                                                                     gaggagCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCt                                <  8:235473/149‑1 (MQ=255)                                                                                                                          gCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCgg                           >  7:246811/1‑149 (MQ=255)                                                                                                                           cGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGt                          <  3:97518/149‑1 (MQ=255)                                                                                                                             attCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTc                                                                <  8:181575/108‑1 (MQ=255)                                                                                                                              ttCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCg                                  <  3:35340/138‑1 (MQ=255)                                                                                                                              ttCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCg                                  >  4:35340/1‑138 (MQ=255)                                                                                                                               tCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGTGaa                       <  6:167385/148‑1 (MQ=255)                                                                                                                               tCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGTGaa                       <  1:194534/148‑1 (MQ=255)                                                                                                                                  gcgcCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGTGAAGCaa                   >  3:187554/1‑149 (MQ=255)                                                                                                                                    gcCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGt                          <  3:133408/140‑1 (MQ=255)                                                                                                                                    gcCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGt                          >  4:133408/1‑140 (MQ=255)                                                                                                                                    gcCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGTGAAGCAACg                 >  2:180421/1‑149 (MQ=255)                                                                                                                                       aGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGTGAAGCAACGTGa              <  8:252714/149‑1 (MQ=255)                                                                                                                                                   gccgccAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAActgctgc                                             <  2:129288/106‑1 (MQ=255)                                                                                                                                                   gccgccAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAActgctgc                                             <  6:195808/106‑1 (MQ=255)                                                                                                                                                   gccgccAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAActgctgc                                             >  5:195808/1‑106 (MQ=255)                                                                                                                                                   gccgccAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAActgctgc                                             >  1:129288/1‑106 (MQ=255)                                                                                                                                                   gccgccAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGTGAAGCAACGTGATTATGTGCAGAc  >  4:305361/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                      TGCTGGGCCTGACACGCACCTCGACACCCTGGCTGCTGTGTATCCTGCTGGGCCTGACCGTGGTCAGTGGCCTGCTCCTCAACCTGGCGGTCAGTGAACGGCTGCGGCGCATAAGCGAGGAGCGTTTCAGCGCCAGCCGTGCACTGGCCGCCAGCGATGCGGAAATCAACGCCAAAGCCGAGTTTCTGG‑CCAAGATCAGCCACGAAATCCGCACCCCGATGAACGGCGTGCTCGGCATGACTGAACTGCTGCTGGGCACACCGCTGTCGGTGAAGCAACGTGATTATGTGCAGAC  >  NC_002947/5487690‑5487984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.