| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5490301 = | 46 (0.890) | 4 (0.080) | 4/238 | NT | 9.4% | coding (482/657 nt) | PP_5714 | hypothetical protein |
| ? | NC_002947 | 5490342 = | 35 (0.740) | coding (441/657 nt) | PP_5714 | hypothetical protein | |||||
GCCATTTTGCTTGTCGACACTGGCCTGGGCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGTGCCTGGCTGTCATTGCGCAGC > NC_002947/5490153‑5490444 | aggctccgccggccattatcaatctgcccagtcgtcgcttcaggcgctgcgcaatgacagccaggcactgaccgcgtttgaatccagggcagtctccaaagcggtcgggcgctttcagttgctgccttgctcacaacagtcgagcggct < 6:187786‑M1/1‑1 (MQ=255) ctccgccggccattatcaatctgcccagtcgtcgcttcaggcgctgcgcaatgacagccaggcactgaccgcgtttgaatccagggcagtctccaaagcggtcgggcgctttcagttgctgccttgctcacaacagtcgagcggcTTCa < 6:131259‑M1/4‑1 (MQ=255) ttGCTTGTCGACACTGGCCTGGGCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATc < 6:190417/148‑1 (MQ=255) cgccggccattatcaatctgcccagtcgtcgcttcaggcgctgcgcaatgacagccaggcactgaccgcgtttgaatccagggcagtctccaaagcggtcgggcgctttcagttgctgccttgctcacaacagtcgagcggcTTCATc < 2:243036‑M1/6‑1 (MQ=255) cgccggccattatcaatctgcccagtcgtcgcttcaggcgctgcgcaatgacagccaggcactgaccgcgtttgaatccagggcagtctccaaagcggtcgggcgctttcagttgctgccttgctcacaacagtcgagcggcTTCATc < 2:140558‑M1/6‑1 (MQ=255) cgccggccattatcaatctgcccagtcgtcgcttcaggcgctgcgcaatgacagccaggcactgaccgcgtttgaatccagggcagtctccaaagcggtcgggcgctttcagttgctgccttgctcacaacagtcgaccggcTTCa < 4:237631‑M1/4‑1 (MQ=255) gACACTGGCCTGGGCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCttttt > 8:197069/1‑135 (MQ=255) gACACTGGCCTGGGCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCttttt < 7:197069/135‑1 (MQ=255) acacTGGCCTGGGCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCAt < 8:182527/149‑1 (MQ=255) cTGGCCTGGGCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCAtgtg > 2:289083/1‑149 (MQ=255) tGGGCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCaa > 6:29839/1‑149 (MQ=255) ggCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCaa < 1:147479/147‑1 (MQ=255) ggCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAac < 2:175389/148‑1 (MQ=255) cGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCAt < 8:228062/149‑1 (MQ=255) tttcGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATg < 1:235841/144‑1 (MQ=255) ggTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCAcc > 1:10829/1‑134 (MQ=255) ggTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCAcc < 2:10829/134‑1 (MQ=255) caggcgctgcgcaatgacagccaggcactgaccgcgtttgaatccagggcagtctccaaagcggtcgggcgctttcagttgctgccttgctcacaacagtcgagcggcTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGa > 1:7097‑M1/109‑148 (MQ=255) aggcgctgcgcaatgacagccaggcactgaccgcgtttgaatccagggcagtctccaaagcggtcgggcgctttcagttgctgccttgctcacaacagtcgagcggcTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGaa > 1:292136‑M1/108‑148 (MQ=255) aGTCTTCGCGGAACCCCTGCAAGTTCAAGTGGATCACTTCGACACGCATGTCCACGACTTTTACTTCACAGTACAACTGAATCAACAAGAAGACCTAAGAGCTATTTTTCAACGACAA‑TTCCATGTGAACAAACACCATGTAGATTaa > 4:35102/1‑148 (MQ=255) ttCGCGGAACCCCTGCAAGTTTAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGc < 3:185294/149‑1 (MQ=255) ccTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACtgttgt > 3:174601/1‑149 (MQ=255) cTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTtgtg < 3:258501/149‑1 (MQ=255) tCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGgc < 2:314447/135‑1 (MQ=255) tCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGgc > 1:314447/1‑135 (MQ=255) cGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAgc < 3:127707/147‑1 (MQ=255) gACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAgcgc < 5:29839/148‑1 (MQ=255) tccagggcagtctccaaagcggtcgggcgctttcagttgctgccttgctcacaacagtcgagcggcTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGAt > 8:45271‑M1/67‑104 (MQ=255) tccagggcagtctccaaagcggtcgggcgctttcagttgctgccttgctcacaacagtcgagcggcTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGAt < 7:45271‑M1/38‑1 (MQ=255) acacGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCAt < 4:80758/98‑1 (MQ=255) acacGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCAt > 3:80758/1‑98 (MQ=255) aTGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGc > 4:462/1‑149 (MQ=255) aGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTCTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCAGCTAGACTGTTGTGAGCAAGGCAGCGACTGAAAGCGCCCGACCGCGTTg > 2:223737/1‑147 (MQ=255) gAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGgaga > 6:20451/1‑149 (MQ=255) gAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGgaga < 1:289083/149‑1 (MQ=255) aCTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGAt < 5:20451/148‑1 (MQ=255) tGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACATATTCCATGTGCACCAACACAATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGAtt > 1:243036/1‑148 (MQ=255) aaCTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAAcgc > 5:187786/1‑149 (MQ=255) tGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCgg > 5:215358/1‑148 (MQ=255) cATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGt > 1:140558/1‑147 (MQ=255) aTGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGgaga < 4:51449/124‑1 (MQ=255) aTGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGgaga > 3:51449/1‑124 (MQ=255) tGAACAAGAAGCCGTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTTCAACAACACCATGTCGATGAAGCCGCTCGACTGTTGTGTGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGt < 3:35102/149‑1 (MQ=255) tGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGt > 1:298816/1‑149 (MQ=255) tGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGt > 1:56763/1‑149 (MQ=255) aaCAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCGATGTGCACCAACACCATGTCGATGAAGCCGGTCGACTGTTGTGAGCAAGGCAGAAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCGGGATTCAACCGCGGTCAGTg > 8:274741/1‑148 (MQ=255) aCAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGaaa < 1:294482/100‑1 (MQ=255) aCAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGaaa > 2:294482/1‑100 (MQ=255) agaagCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCaa < 4:131891/91‑1 (MQ=255) agaagCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCaa > 3:131891/1‑91 (MQ=255) gCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGTGCCTGGCTGt > 1:68649/1‑149 (MQ=255) gCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGTGCCTGGCTGt > 1:63927/1‑149 (MQ=255) ggAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGTAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGTGCCTGGCTGTCAtt < 7:274741/147‑1 (MQ=255) gAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACt < 2:179295/82‑1 (MQ=255) aGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGATCGACTGTTGTGAGCAAgg < 7:212656/73‑1 (MQ=255) aGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGATCGACTGTTGTGAGCAAgg > 8:212656/1‑73 (MQ=255) ggTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGTGCCTGGCTGTCATTgcg > 7:270573/1‑147 (MQ=255) tCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACAGAAAGCGCCAGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGTGCCTGGCTGTCATTGCGCAgc > 3:237631/1‑149 (MQ=255) | GCCATTTTGCTTGTCGACACTGGCCTGGGCCCGCTTGCGGTAGTCTTCGCGGAACCCCTGCAAGTTGAAGTGGATCACTTCGACACGCATGTCCAGGAGTTTTACTTCACTGTTCAACTGCATGAACAAGAAGCCCTTGGAGGTCTTTTTCATCGACAT‑TTCCATGTGCACCAACACCATGTCGATGAAGCCGCTCGACTGTTGTGAGCAAGGCAGCAACTGAAAGCGCCCGACCGCTTTGGAGACTGCCCTGGATTCAAACGCGGTCAGTGCCTGGCTGTCATTGCGCAGC > NC_002947/5490153‑5490444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |