New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2988913	36 (0.700)	3 (0.060)	3/250	NT	8.4%	coding (429/951 nt)	PP_2613	hypothetical protein
	?	NC_002947	= 2988969	31 (0.620)					coding (373/951 nt)	PP_2613	hypothetical protein

CGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCCAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCAT  >  NC_002947/2988848‑2989117                                                                                                                          |                                                                                                                                                     cGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAgcgc                                                                                                                           >  5:329825/1‑149 (MQ=255)    tGGACGACGACCATCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAgg                                                                                                                                               >  1:280048/1‑126 (MQ=255)    tGGACGACGACCATCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAgg                                                                                                                                               <  2:280048/126‑1 (MQ=255)       tcgtcgtcCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTGAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATgtc                                                                                                                     >  5:104372/1‑147 (MQ=255)       tcgtcgtcCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGc                                                                                                                     >  8:254976/1‑149 (MQ=255)                     aTTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCa                                                                                                       >  3:305958/1‑149 (MQ=255)                                 tGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGa                                                                                           >  3:78991/1‑149 (MQ=255)                                 tGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCAGCCAGGTCGTGa                                                                                           >  2:253614/1‑149 (MQ=255)                                      gATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCa                                                                                      <  7:254976/149‑1 (MQ=255)                                        tGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCAt                                                                                     <  4:305958/148‑1 (MQ=255)                                          gTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATggg                                                                                  <  2:326567/149‑1 (MQ=255)                                          gTCAGGTGTGACATGGTGAGGGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATgg                                                                                   <  6:104372/148‑1 (MQ=255)                                           tCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATggg                                                                                  >  7:101041/1‑148 (MQ=255)                                             cGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGc                                                                                 >  5:203699/1‑147 (MQ=255)                                               gtgtGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAagc                                                                             <  6:329825/149‑1 (MQ=255)                                               gtgtGACATGGTGAGTGGCAACGCTGTGGTCAGGAAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAag                                                                              >  6:223415/1‑148 (MQ=255)                                                    aCATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAgcgc                                                                                                                           >  7:231433/1‑98 (MQ=255)                                                    aCATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCGTGGGCAAGCAGCTc                                                                        >  7:269830/1‑149 (MQ=255)                                                    aCAGGGTGAGGGGCAACGCTGTGGGCAGGGAGCACGACCTGCCCCAGGCTGGTGACGTCGGCTGCCAGCGCTGCCAGGCCAACCTCGGCAGCCAgcgc                                                                                                                           <  8:231433/98‑1 (MQ=255)                                                     cATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCtgccactcaccatgtcacaccggcccatcttgcagcctggctgaatgcgctggacgacgaccatcgcaaggcctggctt                                                                       <  3:77785‑M2/149‑80 (MQ=255)                                                              tGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCtgccactcaccatgtcacaccggaccatcttgcagcctggctgaatgcgctggacgacgaccatcgcaaggcctggcttggcccggtg                                                              <  1:218573‑M2/149‑89 (MQ=255)                                                                           gTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTccacca                                                 <  5:223415/149‑1 (MQ=255)                                                                                ggAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCtgccactcaccatgtcacaccggaccatcttgcagcctggctgaatgcgctggacgacgaccatcgcaaggcctggcttggcccggtgtctcggttggcatggcga                                            >  2:218573‑M2/1‑43 (MQ=255)                                                                                ggAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCa                                              >  3:130304/1‑147 (MQ=255)                                                                                 gAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAg                                           <  2:161953/149‑1 (MQ=255)                                                                                   gCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTg                                                             >  2:274431/1‑129 (MQ=255)                                                                                   gCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTg                                                             <  1:274431/129‑1 (MQ=255)                                                                                    cACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGcc                                        <  8:101041/149‑1 (MQ=255)                                                                                          cTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCCAAAc                                   >  1:127331/1‑148 (MQ=255)                                                                                                 aGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCCAAACTCATGACg                           <  6:203699/149‑1 (MQ=255)                                                                                                        tGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGa                                                                                                                         <  6:35177/48‑1 (MQ=255)                                                                                                        tGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGa                                                                                                                         >  5:35177/1‑48 (MQ=255)                                                                                                            gTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCCAAACTCATGACGGTCATCCAggg                >  1:60695/1‑149 (MQ=255)                                                                                                               gTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCGAAACTCATGACGGTCATCCAGGgcgc             >  7:133833/1‑149 (MQ=255)                                                                                                               gTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCCAAACTCATGCCGGTCATCCAGGgcgc             >  6:161518/1‑149 (MQ=255)                                                                                                                  tGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCGCAAACTCATGACGGTCATCCAGGGCGCTGt          >  1:139071/1‑149 (MQ=255)                                                                                                                       gcgcTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCCAAACTCATGACGGTCATCCAGGGCGCTGttcttc     >  6:268666/1‑149 (MQ=255)                                                                                                                         gcTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCGTGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCCAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCa   <  8:269830/149‑1 (MQ=255)                                                                                                                          cTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCCAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCAt  <  5:268666/149‑1 (MQ=255)                                                                                                                          |                                                                                                                                                     CGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTGCAACGTCCACCAGCAAAGGCCCAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCAT  >  NC_002947/2988848‑2989117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.