New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3242037	36 (0.700)	4 (0.080)	4/250	NT	10.2%	coding (114/2289 nt)	PP_2839	hypothetical protein
	?	NC_002947	= 3242069	36 (0.730)					coding (146/2289 nt)	PP_2839	hypothetical protein

GGTGTGCCACGTGCGCTGGAGCGAAACACCTTGAGCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTGGAAGAGATCAAGACGCACCGTGGCGATCTGGCGCG  >  NC_002947/3241921‑3242216                                                                                                                                                     |                                                                                                                                                    ggTGTGCCACGTGCGCTGGAGCGAAACACCTTGGGCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGggt                                                                                                                                                     <  6:299369/149‑1 (MQ=255)    gtgCCACGTGCGCTGGAGCGAAACACCTTGAGCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTggt                                                                                                                                                  >  2:305625‑M2/1‑146 (MQ=255)     tgCCACGTGCGCTGGAGCGAAACACCTTGAGCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTggtg                                                                                                                                                 >  5:45063‑M2/1‑145 (MQ=255)     tgCCACGTGCGCTGGAGCGAAACACCTTGAGCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTggt                                                                                                                                                  >  3:14906‑M2/1‑145 (MQ=255)                 tGGAGCGAAACACCTTGAGCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGgct                                                                                                                                     >  1:111407/1‑149 (MQ=255)                     gCGAAACACCTTGAGCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGctgctg                                                                                                                                 <  5:107313/149‑1 (MQ=255)                       gAAACACCTTGAGCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGc                                                                                                                               >  4:276195/1‑149 (MQ=255)                                     tACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAAt                                                                                                                 >  7:64948/1‑149 (MQ=255)                                       cAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCg                                                                                                               >  2:196070/1‑149 (MQ=255)                                              gCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTg                                                                                                         >  3:189726/1‑148 (MQ=255)                                                   gcgcgcCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGc                                                                                                    >  4:163314/1‑148 (MQ=255)                                                            gtgtgAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGaa                                                                                           <  4:31356/148‑1 (MQ=255)                                                               tgAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCGACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAAcc                                                                                        <  7:232341/148‑1 (MQ=255)                                                               tgAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCACTTGAAGTCCAGTTCCAAAccc                                                                                       >  6:230940/1‑149 (MQ=255)                                                                  gTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTAGAAGGCCAGTTCGAAACCCTCa                                                                                    <  7:48171/149‑1 (MQ=255)                                                                    tCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGaaa                                                                                          >  4:194529/1‑141 (MQ=255)                                                                    tCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGaaa                                                                                          <  3:194529/141‑1 (MQ=255)                                                                      aGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGt                                                                                <  3:276195/149‑1 (MQ=255)                                                                         gcCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCg                                                                             >  7:199944/1‑149 (MQ=255)                                                                         gcCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCg                                                                             >  5:205890/1‑149 (MQ=255)                                                                                        ctggacctgCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACgg                                                              <  2:111407/149‑1 (MQ=255)                                                                                           gacctgCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGat                                                            <  4:189726/148‑1 (MQ=255)                                                                                                      cACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACg                                                               >  3:65743/1‑134 (MQ=255)                                                                                                      cACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACg                                                               <  4:65743/134‑1 (MQ=255)                                                                                                       aCGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCa                                                <  8:199944/148‑1 (MQ=255)                                                                                                       aCGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAg                                               >  2:101539/1‑149 (MQ=255)                                                                                                          ccATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCaa                                            <  3:226788/149‑1 (MQ=255)                                                                                                           cATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAAt                                           <  1:101539/149‑1 (MQ=255)                                                                                                                cccACCGCCCAGGAGGGTATCGAAGAGCATCAGCGGGTggtgggcgatggcgtgaagcgcaggtccaggtcgccgaccttggcgctgaactcacacaaggcgcgcaccgctacgctgtagctcaaggtgtttcgctccagcgcacgtgg                                      <  7:106647‑M2/149‑112 (MQ=255)                                                                                                                 ccACCGCCCAGGAGGGTTTCGAAGGGCATCAGCGGGTggtgggcgatggcgtgaagcgcaggtccaggtcgccgaccttggcgctgaactc                                                                                               >  5:11424‑M2/1‑37 (MQ=255)                                                                                                                 ccACCGCCCAGGAGGGTTTCGAAGGGCATCAGCGGGTggtgggcgatggcgtgaagcgcaggtccaggtcgccgaccttggcgctgaactc                                                                                               <  6:11424‑M2/91‑55 (MQ=255)                                                                                                                 ccACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTg                                     >  1:243909/1‑149 (MQ=255)                                                                                                                 ccACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTg                                     <  3:163314/149‑1 (MQ=255)                                                                                                                  cACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGTAATCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTgg                                    <  5:230940/149‑1 (MQ=255)                                                                                                                   aCCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTGGa                                   <  6:205890/149‑1 (MQ=255)                                                                                                                     cGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGc                                                  <  2:235119/132‑1 (MQ=255)                                                                                                                     cGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGCGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGc                                                  >  1:235119/1‑132 (MQ=255)                                                                                                                              gggTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTGGAAGAGATCAAGa                        <  1:196070/149‑1 (MQ=255)                                                                                                                                      aaGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTGGAAGAGATc                            >  6:217523/1‑137 (MQ=255)                                                                                                                                      aaGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTGGAAGAGATc                            <  5:217523/137‑1 (MQ=255)                                                                                                                                        gggCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGata                                                           >  1:40784/1‑104 (MQ=255)                                                                                                                                        gggCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGata                                                           <  2:40784/104‑1 (MQ=255)                                                                                                                                         ggCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTGGAAGAGATCAAGACGCACCGTGGc             <  8:76449/149‑1 (MQ=255)                                                                                                                                             tCAGCGGGTggtgggcgatggcgtgaagcgcaggtccaggtcgccgaccttggcgctgaactcacacaaggcgcgcaccgctacgctgtagctcaaggtgtttcgctccagcgcacgtggcacaccgcgaccggcaggccgtgttgcct         >  8:106647‑M2/1‑9 (MQ=255)                                                                                                                                                    gtggtgGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTGGAAGAGATCAAGACGCACCGTGGCGATCTGGcgcg  >  7:25952/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GGTGTGCCACGTGCGCTGGAGCGAAACACCTTGAGCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGAAGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGTGCCGACGGATATGACCCTGCCAGCAATCGTCTGGAAGAGATCAAGACGCACCGTGGCGATCTGGCGCG  >  NC_002947/3241921‑3242216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.