| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4425420 = | 51 (0.990) | 3 (0.060) | 3/250 | NT | 6.3% | intergenic (‑478/‑322) | PP_5647/PP_3917 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 4425465 = | 40 (0.810) | intergenic (‑523/‑277) | PP_5647/PP_3917 | hypothetical protein/hypothetical protein | |||||
TCCTCTGGACGGGCCCTCTTGGAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCGCAGATATTCAGCATGCGTAGCTGATGCTCGACCGAGATCGCAC > NC_002947/4425318‑4425604 | tCCTCTGGACGGGCCCTCTTGGAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGcc > 1:78546/1‑149 (MQ=255) gagagttgttttctcttcgaggtgctgacaggagccggttattgattttttcgtttgtacccgtcggtctgatataaatcttctctagtctctgtaggCGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTAc > 4:64729‑M1/99‑148 (MQ=255) tGGACGGGCCCTCTTGGAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTa > 6:21103/1‑146 (MQ=255) cGGGCCCTCTTGGAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGAc < 7:191065/149‑1 (MQ=255) ggCCCTCTTGGAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTa < 4:311041/149‑1 (MQ=255) gCCCTCTTGGAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGAc > 1:273333/1‑146 (MQ=255) ttGGAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGagaa < 2:78546/147‑1 (MQ=255) ggAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGAt < 7:50173/148‑1 (MQ=255) ggAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGAt < 2:273333/148‑1 (MQ=255) tcGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCa < 5:327299/149‑1 (MQ=255) gTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGa > 6:278453/1‑149 (MQ=255) tCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGAc < 2:279625/149‑1 (MQ=255) aggagccggttattgattttttcgtttgtacccgtcggtctgatataaatcttctctagtctctgtaggCGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTgcgc > 1:217943‑M1/70‑115 (MQ=255) aggagccggttattgattttttcgtttgtacccgtcggtctgatataaatcttctctagtctctgtaggCGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTgcgc < 2:217943‑M1/46‑1 (MQ=255) gaccAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACa > 1:299021/3‑148 (MQ=255) cGCCATTACGATCTGACTTGCCACTTTGGCCATTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGaaa > 1:122560/1‑148 (MQ=255) tACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCaa > 5:90552/1‑149 (MQ=255) cGATCGGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAAt > 7:26341/1‑148 (MQ=255) ttGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAAt < 2:261546/135‑1 (MQ=255) ttGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAAt > 1:261546/1‑135 (MQ=255) ttGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTcc > 5:251446/1‑149 (MQ=255) cACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTc < 5:21103/149‑1 (MQ=255) cTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAg < 2:299021/149‑1 (MQ=255) cTTTGGCCGTTATCCCTATCTCTGGTCATACACACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTtata < 2:169882/101‑1 (MQ=255) cTTTGGCCGTTATCCCTATCTCTGGTCATACACACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTtata > 1:169882/1‑101 (MQ=255) ttGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCa < 7:155194/149‑1 (MQ=255) ggCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCa > 8:155194/1‑147 (MQ=255) ggCCATTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCAc < 2:122560/148‑1 (MQ=255) ttATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCg > 3:179569/1‑147 (MQ=255) cTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAGCCGGCTCCTGTCAGCACCTCGCAGAGaa > 8:214650/1‑148 (MQ=255) ctGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGaaaa > 2:75409/1‑144 (MQ=255) tGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATc > 6:15959/1‑149 (MQ=255) gTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCg > 8:189976/1‑148 (MQ=255) gTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCg < 6:251446/148‑1 (MQ=255) tCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCGCa < 5:278453/149‑1 (MQ=255) gtaggcgcacactcaatttagctcaggacttctgagcattgagaggtgcgCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGAAGAgaaaacaactctc > 4:64729‑M2/51‑142 (MQ=255) gcgcacactcaatttagctcaggacttctgagcattgagaggtgcgCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCt < 2:217943‑M2/69‑1 (MQ=255) gcgcacactcaatttagctcaggacttctgagcattgagaggtgcgCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCt > 1:217943‑M2/47‑115 (MQ=255) tctcAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCGCAGATATTCAGCa > 1:144661/1‑149 (MQ=255) ctcAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGaaaa > 4:44769/1‑128 (MQ=255) ctcAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGaaaa < 3:44769/128‑1 (MQ=255) cTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCGCAGATATTCAGCATGCGTAg < 7:189976/148‑1 (MQ=255) gAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCg < 6:51069/124‑1 (MQ=255) gAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCg > 5:51069/1‑124 (MQ=255) aGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCCGTCAGCACCTCGCAGAGAAAACAGATCGCAGATATTCAGCATGCGTAGCTGATGCTCGAc < 7:11094/147‑1 (MQ=255) aGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCCGTCAGCACCTCGCAGAGAAAACAGATCGCAGATATTCAGCATGCGTAGCTGATGCTCGAc > 8:11094/1‑147 (MQ=255) cTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCGCAGATATTCAGCATGCGTAGCTGATGCTCGACCgag < 2:303063/149‑1 (MQ=255) tAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCGCAGATATTCAGCATGCGTAGCTGATGCTCGAcc > 2:139073/1‑145 (MQ=255) aGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCGCAGATATTCAGCATGCGTAGCTGATGCTCGACCGAGATCGCAc < 7:17022/148‑1 (MQ=255) gcgCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTGCTGTCAGCTCCTCGCAGAGAAAACAGATAGCTCATATTCAGCATGCGTa > 1:272083‑M2/4‑119 (MQ=255) | TCCTCTGGACGGGCCCTCTTGGAATCATCGTCTGAACCGGTAGGCCAACCGCCATTACGATCTGACTTGCCACTTTGGCCGTTATCCCTATCTCTGGTCATACGCACCTCTCAATGCTCAGAAGTCCTGAGCTAAATTGAGTGTGCGCCTACAGAGACTAGAGAAGATTTATATCAGACCGACGGGTACAAACGAAAAAATCAATAACCGGCTCCTGTCAGCACCTCGCAGAGAAAACAGATCGCAGATATTCAGCATGCGTAGCTGATGCTCGACCGAGATCGCAC > NC_002947/4425318‑4425604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |