New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5320576 =	42 (0.810)	4 (0.080)	3/248	NT	8.3%	coding (339/801 nt)	PP_4682	TPR repeat‑containing protein
	?	NC_002947	5320623 =	48 (0.970)					coding (292/801 nt)	PP_4682	TPR repeat‑containing protein

GCGGAATACCGGTTGGCGCACTGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTTATAGCCACCCGCCGAGC  >  NC_002947/5320476‑5320769                                                                                                                                                     |                                                                                                                                                    gcgGAATACCGGTTGGCGCACTGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAg                                                                                                                                                    <  6:315860/149‑1 (MQ=255)  cgGAATACCGGTTGGCGCACTGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAgg                                                                                                                                                   <  1:329936/149‑1 (MQ=255)  ccggaggattccggtgtcaccgtgatgatcccgcagggcgcaggcgcttcgggcatccagacgttcccggcgtccaatggcgccgcgccgatcagtacctCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGa                                                                                                                                                     >  6:247255‑M1/101‑148 (MQ=255)  ccggaggattccggtgtcaccgtgatgatcccgcagggcgcaggcgcttcgggcatccagacgttcccggcgtccaatggcgccgcgccgatcagtacctCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAg                                                                                                                                                    >  8:13395‑M1/101‑149 (MQ=255)     aaTACCGGTTGGCGCACTGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TAc                                                                                                                                               <  5:34055/149‑1 (MQ=255)       tACCGGTTGGCGCACTGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACt                                                                                                                                              >  5:150227/1‑148 (MQ=255)       tACCGGTTGGCGCACTGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACt                                                                                                                                              >  6:10391/1‑148 (MQ=255)          cGGTTGGCGCACTGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATc                                                                                                                                          >  6:52223/1‑149 (MQ=255)          cGGTTGGCGCACTGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGCCAATCGGGATGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATc                                                                                                                                          >  5:228289/1‑149 (MQ=255)                      tGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCa                                                                                                                              >  4:141296/1‑149 (MQ=255)                        gggtgttGCGGGGTGCTGGTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCAt                                                                                                                             <  6:228289/143‑1 (MQ=255)                        gcgcTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGCACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCAtt                                                                                                                            >  6:154070/1‑149 (MQ=255)                            tttGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGAc                                                                                                                        >  7:240628/1‑149 (MQ=255)                               cccgcagggcgcaggcgcttcgggcatccagacgttcccggcgtccaatggcgccgcgccgatcagtacctCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAg                                                                                                                                                    <  1:120658‑M1/49‑1 (MQ=255)                               cccgcagggcgcaggcgcttcgggcatccagacgttcccggcgtccaatggcgccgcgccgatcagtacctCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAg                                                                                                                                                    >  2:120658‑M1/72‑120 (MQ=255)                                   ggTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGa                                                                                                                 <  8:240628/149‑1 (MQ=255)                                          ttCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATTGGGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCt                                                                                                           >  1:78075/1‑149 (MQ=255)                                          ttCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGa                                                                                                                         >  5:225047/1‑134 (MQ=255)                                          ttCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGa                                                                                                                         <  6:225047/134‑1 (MQ=255)                                          ttCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCt                                                                                                           <  5:96019/148‑1 (MQ=255)                                          ttCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCt                                                                                                           <  5:52223/148‑1 (MQ=255)                                             aTCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCAtt                                                                                                                            >  6:325355/1‑128 (MQ=255)                                             aTCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCAtt                                                                                                                            <  5:325355/128‑1 (MQ=255)                                             aTCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGAt                                                                                                       >  2:99742/1‑149 (MQ=255)                                             aTCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGAt                                                                                                       >  3:45216/1‑149 (MQ=255)                                                 cAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATAccc                                                                                                   >  3:215523/1‑149 (MQ=255)                                                     gATGGCGCAGGGGTCGTCGGCAATCGGGGTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGGGATCGGCGAGGCTACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGaa                                                                                                <  1:247701/149‑1 (MQ=255)                                                              gggTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTgcgc                                                                                      >  8:52458/1‑149 (MQ=255)                                                                       ggCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGa                                                                             <  7:52458/149‑1 (MQ=255)                                                                          aaTCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGatc                                                                           >  7:287501/1‑148 (MQ=255)                                                                                    ggATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGa                                                                 <  4:45216/148‑1 (MQ=255)                                                                                    ggATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGa                                                                 >  2:98185/1‑148 (MQ=255)                                                                                              gtCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCt                                                                                                           >  1:220764/1‑97 (MQ=255)                                                                                              gtCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCt                                                                                                           <  2:220764/97‑1 (MQ=255)                                                                                                cATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAAtcct                                                     >  1:72580/1‑149 (MQ=255)                                                                                                    ctcgccgatcacgccagggccgatcagtacagggcctgtcagttcggcgAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCggg                                                                              <  1:120658‑M2/71‑1 (MQ=255)                                                                                                    ctcgccgatcacgccagggccgatcagtacagggcctgtcagttcggcgAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCggg                                                                              >  2:120658‑M2/50‑120 (MQ=255)                                                                                                    ctcgccgatcacgccagggccgatcagtacagggcctgtcagttcggcgAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCgg                                                 >  8:13395‑M2/50‑149 (MQ=255)                                                                                                     tcgccgatcacgccagggccgatcagtacagggcctgtcagttcggcgAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCgg                                                 >  6:247255‑M2/49‑148 (MQ=255)                                                                                                         CGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCg                                            <  4:160241‑M1/149‑1 (MQ=255)                                                                                                           AACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTc                                          <  7:276126‑M1/149‑1 (MQ=255)                                                                                                                  aGGCCCTGTACTGATCGGCACTGGCGTTATCGGCGAGG‑TAATGATCTGCGCGGCGCCATTGTACTCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGACCTGCGGGATCATCACGGTGACACCCGAATCATACGGCAGCCTCTGAGCCt                                   >  6:240856/1‑149 (MQ=255)                                                                                                                      ccTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGc                               >  1:241920/1‑149 (MQ=255)                                                                                                                      ccTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGc                               >  2:61130/1‑149 (MQ=255)                                                                                                                       cTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCg                              <  1:61130/149‑1 (MQ=255)                                                                                                                          tACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTg                           >  1:165388/1‑149 (MQ=255)                                                                                                                            cTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGatc                                                                           >  4:314608/1‑99 (MQ=255)                                                                                                                            cTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGatc                                                                           <  3:314608/99‑1 (MQ=255)                                                                                                                             tGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCg                        >  2:74459/1‑149 (MQ=255)                                                                                                                                  ggCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCt                                   >  3:19772/1‑133 (MQ=255)                                                                                                                                  ggCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCt                                   <  4:19772/133‑1 (MQ=255)                                                                                                                                  ggCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCt                                   >  1:195614/1‑133 (MQ=255)                                                                                                                                  ggCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCt                                   <  2:195614/133‑1 (MQ=255)                                                                                                                                  ggCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATACCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGt                    <  4:215523/148‑1 (MQ=255)                                                                                                                                   gCCCTTGCGTGATCGGCGAGG‑TACTGACCGGCGCGGCGCCATTGGCCGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGGCTGCGCCTGGGCGGTGCCGGCGTta                  <  6:66094/149‑1 (MQ=255)                                                                                                                                   gCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGC‑GGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTta                  >  2:249861/1‑148 (MQ=255)                                                                                                                                     ccTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTtata                <  2:241920/149‑1 (MQ=255)                                                                                                                                     ccTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTta                  >  5:233022/1‑147 (MQ=255)                                                                                                                                     ccTGGAGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCCGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTtata                >  4:206110/1‑149 (MQ=255)                                                                                                                                       tGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTTATAGc              >  6:335523/1‑149 (MQ=255)                                                                                                                                              aTCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTTATAGCCACccgc       >  2:250092/1‑149 (MQ=255)                                                                                                                                                 ggcgAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTTATAGCCACccgcc      >  3:191074‑M2/5‑147 (MQ=255)                                                                                                                                                 ggcgAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGC‑GGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTTATAGCCACCCGCCGa    <  1:249861‑M2/144‑1 (MQ=255)                                                                                                                                                  gcgAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGt                                           <  2:43229‑M2/106‑1 (MQ=255)                                                                                                                                                   cgAGG‑TACTGAGCGGCGCGGCGCCATTGGACGCCGGCAACGTCTGGATCCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCAGCGCCTGGGCGGTGCCGGCGTTATAGCCACCCGCCGAGc  <  6:186270‑M2/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCGGAATACCGGTTGGCGCACTGGCGCTTTGCGGGGTGCTGTTCATCGCAGCGATGTCGAAGGGTTCGTCGGCAATCGGGTTGGGATT‑GGTGGTCATCGGCGCCGAACTGACAGGCCCTGTACTGATCGGCCCTGGCGTGATCGGCGAGG‑TACTGATCGGCGCGGCGCCATTGGACGCCGGGAACGTCTGGATGCCCGAAGCGCCTGCGCCCTGCGGGATCATCACGGTGACACCGGAATCCTCCGGCAGCGTCTGCGCCTGGGCGGTGCCGGCGTTATAGCCACCCGCCGAGC  >  NC_002947/5320476‑5320769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.