| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 43823 = | 46 (0.810) | 3 (0.060) | 3/240 | NT | 6.4% | coding (1702/1998 nt) | cadA‑I | cadmium translocating P‑type ATPase |
| ? | NC_002947 | 43868 = | 45 (0.860) | coding (1657/1998 nt) | cadA‑I | cadmium translocating P‑type ATPase | |||||
AACCGCGTTGCAGAGGCTGTAGCCAAACAAGTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGCCAAGGTGGCCATGGTGGGTGACGGCGTCAATGATGCCCCTGCCATGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/43979‑43823‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatggccaCCTTGGCGCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCC > NC_002947/43868‑44015 AACCGCGTTGCAGAGGCTGTAGCCAAACAAGTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGCCAAGGTGGCCATGGTGGGTGACTGCGTCAATGATGCCCCTGC > 7:186940/1‑149 CCGCGTTGCAGAGGCTGTAGCCAAACAAGTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGCCAAGGTGGCCATGGTGGGTGACGGCGTCAATGATGCCCCTGCCA > 7:91545/1‑149 GTTGCAGAGGCTGTAGCCAAACAAGTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGCCAAGGTGGCCATGGTGGGTGACGGCGTCAATGATGCCCCTGCCATGGC < 6:15562/149‑1 TGCAGAGGCTGTAGCCAAACAATTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGCCAAGGTGGCCATGGTGGGTGACGGCGTCAATGATGCCCCTGCCATGGC < 8:110589/147‑1 TGGCCATGGTGGGTGACGGCGTCAATGATGCCCCTGCCATGGCCACCTTGGCGCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGC > 1:208024/1‑148 ctCATGGTGGGTGACGGCGTCAATGATGCCCCTGCCATGGCCACCTTGGCGCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAAC < 7:338796/147‑1 ATGGTGGGTGACGGCGTCAATGATGCCCCTGCCATGGCCACCTTGGCGCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGGCAACTTGTTTGGCTACAGCCTCTGCTAC > 8:338796/1‑146 CCACCTTGGCGCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATG > 7:94259/1‑149 CCACCTTGGCGCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCGTCCGGCATCAGGTCTCCCCACGCGTGATCTAAGCGAACTTGTTTGGCTACAGCCTCTGCACCGGGGTTGTGGGCTCCCGAATTGAAGACCATGCGgtgggtg > 2:67710/1‑142 CACCTTGGCGCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGC < 8:10699/149‑1 ACCTTGGCGCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCC < 8:94259/149‑1 AACCGCGTTGCAGAGGCTGTAGCCAAACAAGTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGCCAAGGTGGCCATGGTGGGTGACGGCGTCAATGATGCCCCTGCCATGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/43979‑43823‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatggccaCCTTGGCGCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCC > NC_002947/43868‑44015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |