New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 487574 = | 43 (0.760) | 4 (0.070) | 3/244 | NT | 9.3% | coding (728/990 nt) | pdxA | 4‑hydroxythreonine‑4‑phosphate dehydrogenase |
? | NC_002947 | 487613 = | 37 (0.690) | coding (689/990 nt) | pdxA | 4‑hydroxythreonine‑4‑phosphate dehydrogenase |
GCGACAAGTTTGGCATTGCCAACCCGCGTATCCTCGTGTGCGGCCTCAACCCGCATGCGGGCGAGGGCGGCCACCTGGGCCGCGAAGAAATCGACATCATCGAGCCGACCCTGGCCCGCCTGCGCACCGAAGGCATGGACCTGCGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/487724‑487574 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggccAGGGTCGGCTCGATGATGTCGATTTCTTCGCGGCCCAGGTGGCCGCCCTCGCCCGCATGCGGGTTGAGGCCGCACACGAGGATACGCGGGTTGGCAATGCCAAACTTGTCGCGCATGTCGGCATGCAGGATACGGGTTACACGTTC > NC_002947/487613‑487758 GCGACAAGTTTGGCATTGCCAACCCGCGTATCCTCGTGTGCGGCCTCAACCCGCATGCGGGCGAGGGCGGCCACCTGGGCCGCGAAGAAATCGACATCATCGAGCCGACCCTGGCCCGCCTGCGCACCGAAGGCATGGACCTGCGCGGG < 1:257061/149‑1 CCTCGTGTGCGGCCTCAACCCGCATGCGGGCGAGGGCGGCCACCTGGGCCGCGAAGAAATCGACATCATCGAGCCGACCCTGGCCCGCCTGCGCACCGAAGGCATGGACCTGCGCGGGC < 5:176427/119‑1 CCTCGTGTGCGGCCTCAACCCGCATGCGGGCGAGGGCGGCCACCTGGGCCGCGAAGAAATCGACATCATCGAGCCGACCCTGGCCCGCCTGCGCACCGAAGGCATGGACCTGCGCGGGC > 6:176427/1‑119 TGGCCCGCCTGCGCACCGAAGGCATGGACCTGCGCGGGCCAGGGTCGGCTCGATGATGTCGATTTCTTCGCGGCCCAGGTGGCCGCCCTCGCCCGCATGCGGGTTGAGGCCGCACACGAGGATACGCGGGTTGGCAATGCCAAACTTGT > 7:68651/1‑149 TGGCCCGCCTGCGCACCGAAGGCATGGACCTGCGCGGGCCAGGGTCGGCTCGATGATGTCGATTTCTTCGCGGCCCAGGTGGCCGCCCTCGCCCGCATGCGGGTTGAGGCCGCACACGAGGATACGC > 1:346946/1‑127 TGGCCCGCCTGCGCACCGAAGGCATGGACCTGCGCGGGCCAGGGTCGGCTCGATGATGTCGATTTCTTCGCGGCCCAGGTGGCCGCCCTCGCCCGCATGCGGGTTGAGGCCGCACACGAGGATACGC < 2:346946/127‑1 GCCCGCCTGCGCACCGAAGGCATGGACCTGCGCGGGCCAGGGTCGGCTCGATGATGTCGATTTCTTCGCGGCCCAGGTGGCCGCCCTCGCCCGCATGCGGGTTGAGGCCGCACACGAGGATACGCGGGTTGGCAATGCCAAACTTGTCG > 2:5864/1‑149 GCCAGGGTCGGCTCGATGATGTCGATTTCTTCGCGGCCCAGGTGGCCGCCCTCGCCCGCATGCGGGTTGAGGCCGCACACGAGGATACGCGGGTTGGCAATGCCAAACTTGTCGCGCATGTCGGCATGCAGGATACGGGTTACACGTTC < 4:311589/149‑1 GCCAGGGTCGGCTCGATGATGTCGATTTCTTCGCGGCCCAGGTGGCCGCCCTCGCCCGCATGCGGGTTGAGGCCGCACACGAGGATACGCGGGTTGGCAATGCCAAA > 3:322947/1‑107 GCCAGGGTCGGCTCGATGATGTCGATTTCTTCGCGGCCCAGGTGGCCGCCCTCGCCCGCATGCGGGTTGAGGCCGCACACGAGGATACGCGGGTTGGCAATGCCAAA < 4:322947/107‑1 GCGACAAGTTTGGCATTGCCAACCCGCGTATCCTCGTGTGCGGCCTCAACCCGCATGCGGGCGAGGGCGGCCACCTGGGCCGCGAAGAAATCGACATCATCGAGCCGACCCTGGCCCGCCTGCGCACCGAAGGCATGGACCTGCGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/487724‑487574 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggccAGGGTCGGCTCGATGATGTCGATTTCTTCGCGGCCCAGGTGGCCGCCCTCGCCCGCATGCGGGTTGAGGCCGCACACGAGGATACGCGGGTTGGCAATGCCAAACTTGTCGCGCATGTCGGCATGCAGGATACGGGTTACACGTTC > NC_002947/487613‑487758 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |