New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 765795 | 39 (0.690) | 3 (0.050) | 3/250 | NT | 6.5% | coding (390/936 nt) | PP_0658 | homocysteine S‑methyltransferase family protein |
? | NC_002947 | = 765837 | 49 (0.890) | coding (432/936 nt) | PP_0658 | homocysteine S‑methyltransferase family protein |
GTGAAGAACGCTTTGCCGCCGAAGGGCGACAGCTGGCCCATATCGCAGGCCAGCTTGCGCGGCACGCGGCAGATAGCGGCGCGCACCCGGTCAGGGTGGCAGGTTCGCTGCCGCCGCTGTTCGGGTCCTACCGGCCCGACCTGTTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/765647‑765795 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagGCCCTGGAGCAACGGGGTCAGCACCTCTGCCACACGCTCGGGCTGGAACAGGTCGGGCCGGTAGGACCCGAACAGCGGCGGCAGCGAACCTGCCACCCTGACCGGGTGCGCGCCGCTATCTGCCGCGTGCCGCGCAAGCTGGCCTGCG < NC_002947/765837‑765690 GTGAAGAACGCTTTGCCGCCGAAGGGCGACAGCTGGCCCATATCGCAGGCCAGCTTGCGCGGCACGCGGCAGATAGCGGCGCGCACCCGGTCAGGGTGGCAGGTTCGCTGCCGCCGCTGTTCGGGTCCTACCGGCCCGCCCTGTTCCAG > 4:100053/1‑149 GTGAAGAACGCTTTGCCGCCGAAGGGCGACAGCTGGCCCATATCGCAGGCCAGCTTGCGCGGCACGCGGCAGATAGCGGCGCGCACCCGGTCAGGGTGGCAGGTTCGCTGCCGCCGCTGTTCGGGTCCTACCGGCCCGACCTGTTCCAG < 3:250713/149‑1 AGCTTGCGCGGCACGCGGCAGATAGCGGCGCGCACCCGGTCAGGGTGGCAGGTTCGCTGCCGCCGCTGTTCGGGTCCTACCGGCCCGACCTGTTCCAGGCCCTGGAGCAACGGGGTCAGCACCTCTGCCACACGCTCGGGCTGGAACAG < 7:94056/149‑1 TGGCAGGTTCGCTGCCGCCGCTGTTCGGGTCCTACCGGCCCGACCTGTTCCAGGCCCTGGAGCAACGGGGTCAGCACCTCTGCCACACGCTCGGGCTGGAACA < 7:17654/103‑1 TGGCAGGTTCGCTGCCGCCGCTGTTCGGGTCCTACCGGCCCGACCTGTTCCAGGCCCTGGAGCAACGGGGTCAGCACCTCTGCCACACGCTCGGGCTGGAACA > 8:17654/1‑103 CCAGGCCCTGGAGCAACGGGGTCAGCACCTCTGCCACACGCTCGGGCTGGAACAGGTCGGGCCGGTAGGACCCGAACAGCGGCGGCAGCGAACCTGCCACCCTGACCGGGTGCGCGCCGCTATCTGCCGCGTGCCGCGCAAGCTGGCCT < 4:8113/149‑1 GGCCCTGGAGCAACGGGGTCAGCACCTCTGCCACACGCTCGGGCTGGAACAGGTCGGGCCGGTAGGACCCGAACAGCGGCGGCAGCGAACCTGCCACCCTGACCGGGTGCGCGCCGCTATCTGCCGCGTGCCGCGCAAGCTGGCCTGCG < 2:314648/149‑1 GGCCCTGGAGCAACGGGGTCAGCACCTCTGCCACACACTCGGGCTGGAACAGGTCGGGCCGGTAGGACCCGAACAGCGGCGGCAGCGAACCTGCCACCCTGACCGGGTGCGCGCCGCTATCTGCCGCGTGCCGCGCAAGCTGGCCTGC > 6:31222/1‑148 GTGAAGAACGCTTTGCCGCCGAAGGGCGACAGCTGGCCCATATCGCAGGCCAGCTTGCGCGGCACGCGGCAGATAGCGGCGCGCACCCGGTCAGGGTGGCAGGTTCGCTGCCGCCGCTGTTCGGGTCCTACCGGCCCGACCTGTTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/765647‑765795 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagGCCCTGGAGCAACGGGGTCAGCACCTCTGCCACACGCTCGGGCTGGAACAGGTCGGGCCGGTAGGACCCGAACAGCGGCGGCAGCGAACCTGCCACCCTGACCGGGTGCGCGCCGCTATCTGCCGCGTGCCGCGCAAGCTGGCCTGCG < NC_002947/765837‑765690 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |