| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1617057 = | 41 (0.730) | 3 (0.060) | 3/248 | NT | 6.4% | coding (202/1515 nt) | PP_1416 | tricarboxylate transport protein TctA |
| ? | NC_002947 | 1617095 = | 49 (0.900) | coding (164/1515 nt) | PP_1416 | tricarboxylate transport protein TctA | |||||
TACAACCTGGTCACCGCCCTCTCCGGCACCTTGATCGGCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAACGGCGTGGCCCTGCTGATCCCCATCGCCTTTGCCCTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1617207‑1617057‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCC > NC_002947/1617095‑1617238 TACAACCTGGTCACCGCCCTCTCCGGCACCTTGATCGGCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAACGGCGTGGCCCTGCTGATCCCCATCGCCTTTGCCCTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGC < 2:347625/149‑1 CCCTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAG > 6:42325/1‑149 CTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGT > 4:26102/1‑149 CTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTA < 2:264551/98‑1 GGCCGAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCC < 5:141517/149‑1 TACAACCTGGTCACCGCCCTCTCCGGCACCTTGATCGGCACCGTGGTCGGCCTGCTACCGGGCCTGGGCCCGATCAACGGCGTGGCCCTGCTGATCCCCATCGCCTTTGCCCTCGGCCTGCCGCCGGAATCGGCGCTGATCCTGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1617207‑1617057‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgAGGGCAAAGGCGATGGGGATCAGCAGGGCCACGCCGTTGATCGGGCCCAGGCCCGGTAGCAGGCCGACCACGGTGCCGATCAAGGTGCCGGAGAGGGCGGTGACCAGGTTGTAGGGGGACAGGGCAATGCCGAAGCCCTGGCCC > NC_002947/1617095‑1617238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |