New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1764244	43 (0.760)	5 (0.090)	3/244	NT	11.0%	coding (152/735 nt)	PP_1573	major tail protein
	?	NC_002947	= 1764290	40 (0.750)					coding (198/735 nt)	PP_1573	major tail protein

CATGGCGATTCTCGCTCAGGGTACCCAGGTCTATGCCCTGGTGCCCACAGCTGCAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1764092‑1764244 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcgaAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTCGCTGAGACAGGTCACTTCAACCTGGTCAGCGGGGTTCCCGCCTGGACTGAAGGCGGTGGCGCATTCAACCTCCATGACTTCGAATACGGTACGGTTTGC  <  NC_002947/1764290‑1764144                                                                                                                                                                                                                                                                                                              CATGGCGATTCTCGCTCAGGGTACCCAGGTCTATGCCCTGGTGCCCACAGCTGCAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCT                                                                                                                                                           >  5:188218/1‑147                                                     GCAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGGACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTC                                                                                                     >  5:295067/1‑149                                                     GCAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTC                                                                                                     >  5:306489/1‑149                                                                CGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGAAGCCTGGCCCGGGGTGCTAAGGCCACGCAGGTACTTGCGCACGGTGTCGCTGAGACAGG                                                                                          <  8:203307/149‑1                                                                 GTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGGACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTCGCTGAGACAGGT                                                                                         <  6:295067/149‑1                                                                 GTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTCGCTGAGACAGGT                                                                                         <  6:306489/149‑1                                                                                                                                                      GCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTCGCTGAGACAGGTCACTTCAACCTGGTCAGCGGGGTTCCCGCCTGGACTGAAGGCGGTGGCGCATTCAACCTCCATGACTTCGAATACGGTACGGTTT    >  7:109081/1‑149                                                                                                                                                       CGAAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTCGCTGAGACAGGTCACTTCAACCTGGTCAGCGGGGTTCCCGCCTGGACTGAAGGCGGTGGCGCATTCAACCTCCATGACTTCGAATACGGTACGGTTTG   >  1:47066/1‑149                                                                                                                                                        GAAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTCGCTGAGACAGGTCACTTCAACCTGGTCAGCGGGGTTCCCGCCTGGACTGAAGGCGGTGGCGCATTCAACCTCCATGACTTCGAATACGGTACGGTTTGC  <  3:31921/149‑1                                                                                                                                                         AAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTCGCTGAGACAGGTCACTTCAACCTGGTCAGCGGGGTTCCCGCCTGGACTGAAGGCGGTGGCGCATTCAACCTCCATGACTTCGAATACGGTACGGTTTG   >  3:222275/1‑147                                                                                                                                                                                                                                                                                                              CATGGCGATTCTCGCTCAGGGTACCCAGGTCTATGCCCTGGTGCCCACAGCTGCAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1764092‑1764244 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcgaAGCCTGGCCCGGGGTGCGAAGGCCACGCAGGTACTTGCGCACGGTGTCGCTGAGACAGGTCACTTCAACCTGGTCAGCGGGGTTCCCGCCTGGACTGAAGGCGGTGGCGCATTCAACCTCCATGACTTCGAATACGGTACGGTTTGC  <  NC_002947/1764290‑1764144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.