New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1764244	43 (0.760)	5 (0.090)	3/244	NT	11.0%	coding (152/735 nt)	PP_1573	major tail protein
	?	NC_002947	= 1764290	40 (0.750)					coding (198/735 nt)	PP_1573	major tail protein

GCAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACA  >  NC_002947/1764144‑1764419                                                                                                                                                   |                                                                                                                                   gCAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTtc                                                                                                                                  <  3:31921‑M2/149‑3 (MQ=255)  cAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTtcg                                                                                                                                 >  1:47066‑M2/1‑146 (MQ=255)  cAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTt                                                                                                                                   >  3:222275‑M2/1‑146 (MQ=255)   aaaCCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTtcgc                                                                                                                                >  7:109081‑M2/1‑145 (MQ=255)        gtaccgtaTTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGAcc                                                                                                                           <  4:73111/149‑1 (MQ=255)                     aGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑cc                                                                                                             <  4:128432/149‑1 (MQ=255)                      gTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑ccc                                                                                                            <  4:290302/149‑1 (MQ=255)                         aTGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACg                                                                                                         >  2:173886/1‑149 (MQ=255)                          tGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGCCCCTCAACGTCGA‑CCCACg                                                                                                         >  1:309002/1‑148 (MQ=255)                           ggAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGc                                                                                                        >  7:104083/1‑148 (MQ=255)                                  gAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCt                                                                                                 <  7:92659/148‑1 (MQ=255)                                   aaTGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTc                                                                                                <  5:295920/148‑1 (MQ=255)                                    aTGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCg                                                                                               >  6:119177/1‑148 (MQ=255)                                           aCCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTgcg                                                                                       >  2:199449/1‑149 (MQ=255)                                               ccgtCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCGCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCtt                                                                                   <  6:157393/146‑1 (MQ=255)                                                 ttCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTtca                                                                                 >  5:325325/1‑149 (MQ=255)                                                      tCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTtcat                                                                                >  8:107823/1‑145 (MQ=255)                                                           gCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCg                                                                       >  1:156141/1‑149 (MQ=255)                                                              ggAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGaa                                                                    <  2:156141/149‑1 (MQ=255)                                                               gAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCgg                                                                      >  2:254367/1‑146 (MQ=255)                                                                   cccGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCt                                                                                                 >  8:103602/1‑115 (MQ=255)                                                                   cccGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCt                                                                                                 <  7:103602/115‑1 (MQ=255)                                                                   cccGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAgacga                                                               >  7:1000/1‑149 (MQ=255)                                                                       cTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGccac                                                            >  8:159745/1‑148 (MQ=255)                                                                            cAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCga                                                      >  4:278623/1‑149 (MQ=255)                                                                            cAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCga                                                      <  7:107823/149‑1 (MQ=255)                                                                              ggTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCgaga                                                    <  6:325325/149‑1 (MQ=255)                                                                                       gACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGGCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGtt                                           <  4:31921/149‑1 (MQ=255)                                                                                        aCCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTtcgctgagacaggtcacttcaacctggtcagcggggttcccgcctggactgaaggcggtggcgcattcaacctccatgacttcgaatac                                           <  6:306489‑M2/149‑90 (MQ=255)                                                                                        aCCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTtcgctgagacaggtcacttcaacctggtcagcggggtccccgcctggactgaaggcggtggcgcattcaacctccatgacttcgaatac                                           <  6:295067‑M2/149‑90 (MQ=255)                                                                                        aCCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGtt                                           <  8:104083/148‑1 (MQ=255)                                                                                        aCCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGtt                                           <  1:173886/148‑1 (MQ=255)                                                                                         ccTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTgg                                         <  1:254367/149‑1 (MQ=255)                                                                                         ccTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTAGCACCCCGGGCCAGGCTtcgctgagacaggtcacttcaacctggtcagcggggttcccgcctggactgaaggcggtggcgcattcaacctccatgacttcgaatacg                                          <  8:203307‑M2/149‑91 (MQ=255)                                                                                          cTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATTAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTggg                                        <  5:119177/149‑1 (MQ=255)                                                                                          cTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTggg                                        >  1:242284/1‑149 (MQ=255)                                                                                             tctcAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGggtgg                                     >  3:345686/1‑149 (MQ=255)                                                                                               tcAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCgaga                                                    >  8:151982/1‑132 (MQ=255)                                                                                                   cGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGtt                               >  1:357424/1‑149 (MQ=255)                                                                                                    gACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTtcgctgagacaggtcacttcaacctggtcagcggggttcccgcctggactgaaggcggtggcgcattcaacctccatgacttcgaatacggtacggtttgc                               >  5:306489‑M2/1‑48 (MQ=255)                                                                                                    gACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTtcgctgagacaggtcacttcaacctggtcagcggggtccccgcctggactgaaggcggtggcgcattcaacctccatgacttcgaatacggtacggtttgc                               >  5:295067‑M2/1‑48 (MQ=255)                                                                                                        ccGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACCCCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCt                          >  7:225126/1‑149 (MQ=255)                                                                                                         cGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTtcatca                                                                              >  6:151999/1‑96 (MQ=255)                                                                                                            gcgcAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACg                      <  3:278623/149‑1 (MQ=255)                                                                                                                aaGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCaa                  <  2:357424/149‑1 (MQ=255)                                                                                                                      cTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGATCCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCa             >  1:88835/1‑149 (MQ=255)                                                                                                                              ccTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCca    >  3:240399/1‑149 (MQ=255)                                                                                                                                  cGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCcaca  <  4:345686/147‑1 (MQ=255)                                                                                                                                       cccGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAgacga                                                               <  3:298811/81‑1 (MQ=255)                                                                                                                                       cccGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAgacga                                                               >  4:298811/1‑81 (MQ=255)                                                                                                                                                   |                                                                                                                                   GCAAACCGTACCGTATTCGAAGTCATGGAGGTTGAATGCGCCACCGCCTTCAGTCCAGGCGGGAACCCCGCTGACCAGGTTGAAGTGACCTGTCTCAGCGACACCGTGCGCAAGTACCTGCGTGGCCTTCGCACCCCGGGCCAGGCTTCGCTGACCCTCAACGTCGA‑CCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACA  >  NC_002947/1764144‑1764419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.