New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2057823	18 (0.320)	4 (0.090)	3/210	NT	15.5%	intergenic (+39/+89)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2057863	29 (0.630)					intergenic (+79/+49)	PP_1832/PP_1833	oxidase/hypothetical protein

GCTGGGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2057657‑2057823 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgctcctacGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCATGCCCTG  <  NC_002947/2057863‑2057716                                                                                                                                                                                                                                                                                                                              GCTGGGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGTAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGC                                                                                                                                                                        >  5:252103/1‑149     GGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGG                                                                                                                                                                     <  3:133757/148‑1      GTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTG                                                                                                                                                                   <  8:191786/149‑1             TGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGC                                                                                                                                                            >  7:4646/1‑149                   ATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTA                                                                                                                                                       <  3:8069/148‑1                      CACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGAC                                                                                                                                                   >  8:30216/1‑149                      CACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGATGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGAC                                                                                                                                                   >  8:251235/1‑149                                  TGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGAACGAGCTGTAATCGCATTGCCGGCCGCTTCGC                                                                                                                                                                        <  1:225524/117‑1                                  TGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGC                                                                                                                                                                        >  2:225524/1‑116                                                                     CAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGG                                                                                                    <  7:251235/149‑1                                                                     CAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGG                                                                                                    <  7:30216/149‑1                                                                                             ACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCC                                                                                            >  1:13479/1‑133                                                                                             ACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCC                                                                                            <  2:13479/133‑1                                                                                                                                                      CGGGTGACCCCGCTCCTACGACCCACGGTTGCGCCGCCCTTCGGCATCGCGCAGTCAATGAAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAA                    <  4:227233/149‑1                                                                                                                                                            AACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGC              >  2:312361/1‑149                                                                                                                                                                        CGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGCCACATCGCCCGTAAACCGCGCCTGCATGCCCTG  >  1:1491/1‑149                                                                                                                                                                                                                                                                                                                              GCTGGGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCG‑ACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2057657‑2057823 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgctcctacGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCATGCCCTG  <  NC_002947/2057863‑2057716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.