New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2079256 = | 49 (0.870) | 3 (0.060) | 3/240 | NT | 6.8% | intergenic (‑55/‑75) | PP_1855/earP | hypothetical protein/EF‑P arginine 32 rhamnosyl‑transferase |
? | NC_002947 | 2079298 = | 37 (0.700) | intergenic (‑97/‑33) | PP_1855/earP | hypothetical protein/EF‑P arginine 32 rhamnosyl‑transferase |
GGCCAGGCGCCAAGTCACGCCAATATCGCCGTAGTTGTCGACGACGCTGCAGAAGATGTCCCAGGTGGCTTTCATGCGCCCCTCCCGTGCGGGTGCAAAAACCGCGAATTCTGCGCATAAATTGGCGCTGACAAAAGCACCTGCGCAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2079405‑2079256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcagaaTTCGCGGTTTTTGCACCCGCACGGGAGGGGCGCATGAAAGCCACCTGGGACATCTTCTGCAGCGTCGTCGACAACTACGGCGATATTGGCGTGACTTGGCGCCTGGCCCGGCAGTTGGTGGCCGAGCACGGCCTGGCGGTGCG > NC_002947/2079298‑2079440 GGCCAGGCGCCAAGTCACGCCAATATCGCCGTAGTTGTCGACGACGCTGCAGAAGATGTCCCAGGTGGCTTTCATGCGCCCCTCCCGTGCGGGTGCAAAAACCGCGAATTCTGCGCATAAATTGGCGCTGACAAAAGCACCTGCGCAG > 7:78586/1‑148 CGCGAATTCTGCGCATAAATTGGCGCTGACAAAAGCACCTGCGCAGAATTCGCGGTTTTTGCACCCGCACGGGAGGGGCGCATGAAAGCCACCTGGGACATCTTCTGCAGCGTCGTCGACAACTACGGCGATATTGGCGT > 7:105022/1‑140 CGCGAATTCTGCGCATAAATTGGCGCTGACAAAAGCACCTGCGCAGAATTCGCGGTTTTTGCACCCGCACGGGAGGGGCGCATGAAAGCCACCTGGGACATCTTCTGCAGCGTCGTCGACAACTACGGCGATATTGGCGT < 8:105022/140‑1 AATTCTGCGCATAAATTGGCGCTGACAAAAGCACCTGCGCAGAATTCGCGGTTTTTGCACCCGCACGGGAGGGGCGCATGAAAGCCACCTGGGACATCTTCTGCAGCGTCGTCGACAACTACGGCGATATTGGCGTGACTTGGCGCCTG > 2:318603/1‑149 CGCAGAATTCGCGGTTTTTGCACCCGCACGGGAGGGGCGCATGAAAGCCACCTGGGACATCTTCTGCAGCGTCGTCGACAACTACGGCGATATTGGCGTGACTTGGCGCCTGGCCCGGCAGTTGGTGGCCGAGCACGGCCTGGCGGTGC > 7:79391/1‑149 GCAGAATTCGCGGTTTTTGCACCCGCACGGGAGGGGCGCATGAAAGCCACCTGGGACATCTTCTGCAGCGTCGTCGACAACTACGGCGATATTGGCGTGACTTGGCGCCTGGCCCGGCAGTTGGTGGCCGAGCACGGCCTGGCGGTGCG > 6:99361/1‑149 GGCCAGGCGCCAAGTCACGCCAATATCGCCGTAGTTGTCGACGACGCTGCAGAAGATGTCCCAGGTGGCTTTCATGCGCCCCTCCCGTGCGGGTGCAAAAACCGCGAATTCTGCGCATAAATTGGCGCTGACAAAAGCACCTGCGCAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2079405‑2079256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcagaaTTCGCGGTTTTTGCACCCGCACGGGAGGGGCGCATGAAAGCCACCTGGGACATCTTCTGCAGCGTCGTCGACAACTACGGCGATATTGGCGTGACTTGGCGCCTGGCCCGGCAGTTGGTGGCCGAGCACGGCCTGGCGGTGCG > NC_002947/2079298‑2079440 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |