| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3631641 = | 41 (0.730) | 3 (0.050) | 3/252 | NT | 7.4% | coding (535/1368 nt) | PP_5590 | hypothetical protein |
| ? | NC_002947 | 3631699 = | 35 (0.630) | coding (593/1368 nt) | PP_5590 | hypothetical protein | |||||
ACCAGAACACACCCTTGTCGCCACTGCCACCCGGCAGGTACCAGGGCATCTGCAAATCGGCCCGCGAGTCATTGGTGAGCACGTGCTTGCCGTCGGCGGTGGTCAGGTACTGATTGAAGCTGGCGTGCCAGGACGCACCCCGCCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3631788‑3631641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgGCAAGCACGTGCTCACCAATGACTCGCGGGCCGATTTGCAGATGCCCTGGTACCTGCCGGGTGGCAGTGGCGACAAGGGTGTGTTCTGGTCCATCCGCATGACCAACGACGGCCCGCCCCTGCGTGCCGGGGAGGCCATTACCGGC > NC_002947/3631699‑3631844 ACCAGAACACACCCTTGTCGCCACTGCCACCCGGCAGGTACCAGGGCATCTGCAAATCGGCCCGCGAGTCATTGGTGAGCACGTGCTTGCCGTCGGCGGTGGTCAGGTACTGATTGAAGCTGGCGTGCCAGGACGCACCCCGCCAACG > 8:221227/1‑148 CCAGAACACACCCTTGTCGCCACTGCCACCCGGCAGGTACCAGGGCATCTGCAAATCGGCCCGCGAGTCATTGGTGAGCACGTGCTTGCCGTCGGCGGTGGTCAGGTACTGATTGAAGCTGGCGTGCCAGGCCGCACCCCGCCAACG > 8:301878/1‑147 ACGTGCTTGCCGTCGGCGGTGGTCAGGTACTGATTGAAGCTGGCGTGCCAGGACGCACCCCGCCAACGACAAGCACGTGCTCACCAATGACTCGCGGGCCGATTTGCAGATGCCCTGGTACCTGCCGGGTGGCAGTGGCGACAAGGGTG > 6:40106/1‑149 CCGTCGGCGGTGGTCAGGTACTGATTGAAGCTGGCGTGCCAGGACGCACCCCGCCAACGGCAAGCACGTGCTCACCAATGACTCGCGGGCCGATTTGCAGATGCCCTGGTACCTGCCGGGTGGCAGTGGCGACAAGG > 1:217871/1‑137 CCGTCGGCGGTGGTCAGGTACTGATTGAAGCTGGCGTGCCAGGACGCACCCCGCCAACGGCAAGCACGTGCTCACCAATGACTCGCGGGCCGATTTGCAGATGCCCTGGTACCTGCCGGGTGGCAGTGGCGACAAGG < 2:217871/137‑1 ACGGCAAGCACGTGCTCACCAATGACTCGCGGGCCGATTTGCAGATGCCCTGGTACCTGCCGGGTGGCAGTGGCGACAAGGGTGTGTTCTGGTCCATCCGCATGACCAACGACGGCCCGCCCCTGCGTGCCGGGGAGGCCATTACCGGC < 4:123162/149‑1 ACCAGAACACACCCTTGTCGCCACTGCCACCCGGCAGGTACCAGGGCATCTGCAAATCGGCCCGCGAGTCATTGGTGAGCACGTGCTTGCCGTCGGCGGTGGTCAGGTACTGATTGAAGCTGGCGTGCCAGGACGCACCCCGCCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3631788‑3631641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgGCAAGCACGTGCTCACCAATGACTCGCGGGCCGATTTGCAGATGCCCTGGTACCTGCCGGGTGGCAGTGGCGACAAGGGTGTGTTCTGGTCCATCCGCATGACCAACGACGGCCCGCCCCTGCGTGCCGGGGAGGCCATTACCGGC > NC_002947/3631699‑3631844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |