| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3903215 = | 29 (0.510) | 3 (0.060) | 3/246 | NT | 9.1% | coding (1528/1593 nt) | ilvA‑I | threonine deaminase |
| ? | NC_002947 | 3903252 = | 32 (0.590) | coding (1491/1593 nt) | ilvA‑I | threonine deaminase | |||||
GGCCAGGGGCGTTGCTGGGGTTTCTGGAGCGGTTGGGCAAGCGTTGGAACATCAGCCTGTTCCATTACCGCAACCATGGTGCGGCGGAGGCGCGGGTGTTCGCTGCCTTGGAAGTGCCAGCGGACGAGTTGGCGGGCTTGCCGTCGACGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3903367‑3903215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggCACTTCCAAGGCAGCGAACACCCGCGCCTCCGCCGCACCATGGTTGCGGTAATGGAACAGGCTGATGTTCCAACGCTTGCCCAACCGCTCCAGAAACCCCAGCAACGCCCCTGGCCGTTCGGGGAACTCGAAGCGCAGTACCCGC > NC_002947/3903252‑3903396 GGCCAGGGGCGTTGCTGGGGTTTCTGGAGTGGTTGGGCAAGCGTTGGAACATCAGCCTGTTCCATTACCGCAACCATGGTGCGGCGGAGGCGCGGGTGTTCGCTGCCTTGGAAGTGCCAGCGGACGAGTTGGCGGGCTTGCCGTCGACG > 1:159154/1‑149GGCCAGGGGCGTTGCTGGGGTTTCTGGAGCGGTTGGGCAAGCGTTGGAACATCAGCCTGTTCCATTACCGCAACCATGGTGCGGCGGAGGCGCGGGTGTTCGCTGCCTTGGAAGTGCCAGCGGACGAGTTGGCGGGCTTGCCGTCGACG > 4:284520/1‑149 CAGGGGCGTTGCTGGGGTTTCTGGAGCGGTTGGGCAAGCGTTGGAACATCAGCCTGTTCCATTACCGCAACCATGGTGCGGCGGAGGCGCGGGTGTTCGCTGCCTTGGAAGTGCCAGCGGACGAGTTGGCGGGCTTGCCGTCGACGCTG > 1:83507/1‑149 AGGGGCGTTGCTGGGGTTTCTGGAGCGGTTGGGCAAGCGTTGGAACATCAGCCTGTTCCATTACCGCAACCATGGTGCGGCGGAGGCGCGGGTGTTCGCTGCCTTGGAAGTGCCAGCGGACGAGTTGGCGGGCTTGCCGTCGACGCTG > 4:52216/1‑148 GTGCCAGCGGACGAGTTGGCGGGCTTGCCGTCGACGCTGGCACTTCCAAGGCAGCGAACACCCGCGCCTCCGCCGCACCATGGTTGCGGTAATGGAACAGGCTGATGTTCCAACGCTTGCCCAACCGCTCCAGAAACCCCAGCAACGCC > 3:333235/1‑149 CCAGCGGACGAGTTGGCGGGCTTGCCGTCGACGCTGGCACTTCCAAGGCAGCGAACACCCGCGCCTCCGCCGCACCATGGTTGCGGTAATGGAACAGGCTGATGTTCCAACGCTTGCCCAACCGCTCCA < 7:156751/129‑1 CCAGCGGACGAGTTGGCGGGCTTGCCGTCGACGCTGGCACTTCCAAGGCAGCGAACACCCGCGCCTCCGCCGCACCATGGTTGCGGTAATGGAACAGGCTGATGTTCCAACGCTTGCCCAACCGCTCCA > 8:156751/1‑129 GCTGGCACTTCCAAGGCAGCGAACACCCGCGCCTCCGCCGCACCATGGTTGCGGTAATGGAACAGGCTGATGTTCCAACGCTTGCCCAACCGCTCCAGAAACCCCAGCAACGCCCCTGGCCGTTCGGGGAACTCGAAGCGCAGTA > 1:166555/1‑145 GCTGGCACTTCCAAGGCAGCGAACACCCGCGCCTCCGCCGCACCATGGTTGCGGTAATGGAACAGGCTGATGTTCCAACGCTTGCCCAACCGCTCCAGAAACCCCAGCAACGCCCCTGGCCGTTCGGGGAACTCGAAGCGCAGTA < 2:166555/145‑1 CTGGCACTTCCAAGGCAGCGAACACCCGCGCCTCCGCCGCACCATGGTTGCGGTAATGGAACAGGCTGATGTTCCAACGCTTGCCCAACCGCTCCAGAAACCCCAGCAACGCCCCTGGCCGTTCGGGGAACTCGAAGCGCAGTACCCGC > 2:175448/1‑149 GGCCAGGGGCGTTGCTGGGGTTTCTGGAGCGGTTGGGCAAGCGTTGGAACATCAGCCTGTTCCATTACCGCAACCATGGTGCGGCGGAGGCGCGGGTGTTCGCTGCCTTGGAAGTGCCAGCGGACGAGTTGGCGGGCTTGCCGTCGACGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3903367‑3903215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggCACTTCCAAGGCAGCGAACACCCGCGCCTCCGCCGCACCATGGTTGCGGTAATGGAACAGGCTGATGTTCCAACGCTTGCCCAACCGCTCCAGAAACCCCAGCAACGCCCCTGGCCGTTCGGGGAACTCGAAGCGCAGTACCCGC > NC_002947/3903252‑3903396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |