| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4117855 | 43 (0.760) | 5 (0.090) | 5/244 | NT | 11.3% | coding (545/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta |
| ? | NC_002947 | = 4117881 | 38 (0.710) | coding (571/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta | |||||
GCAGCATGTCGGTGCGCATGAGCTACCCCACCATGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4117705‑4117855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccggCCAGCTCACCGTAGGGTACGGAACGTCCGGTCGTGGTATGTACTACGTTACCCGGTGTGGTAGAAAGCTCATCGACCGGTACACCCAGGTGTTCGGCGCCCGCCTGCAGCAGCATGCCCCGGGCGAGCGCGCCCAGACGGCGCATGGT < NC_002947/4117881‑4117734 GCAGCATGTCGGTGCGCATGAGCTACCCCACCATGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACC < 2:226952/149‑1GCAGCATGTCGGTGCGCATGAGCTACCCCACCATGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGAC < 6:17784/148‑1 CCCACCATGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGCCAGCTCACCGTAGGGTACGGAAC > 2:266808/1‑149 CGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGCCAGCTCACCGTAGGGTACGGAACGTCCGGTCG < 1:70665/149‑1 GCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGCCAGCTCACCGTAGGGTACGGAACGTCCGGTCGTGGTATGTAC < 1:266808/149‑1 GCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGCCAGCTCACCGTAGGGTACGGAACGTCCGGTCGT < 5:226000/121‑1 GCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGCCAGCTCACCGTAGGGTACGGAACGTCCGGTCGT > 6:226000/1‑121 CGGCCAGCTCACCGTAGGGTACGGAACGTCCGGTCGTGGTATGTACTACGTTACCCGGTGTGGTAGAAAGCTCATCGACCGGTACACCCAGGTGTTCGGCGCCCGCCTGCAGCAGCATGCCCCGGGCGAGCGCGCCCAGACGGCGCATG > 5:364264/1‑149 GCCAGCTCACCGTAGGGTACGGAACGTCCGGTCGTGGTATGTACTACGTTACCCGGTGTGGTAGAAAGCTCATCGACCGGTACACCCAGGTGTTCGGCGCCCGCCTGCAGCAGCATGCCCCGGGCGAGCGCGCCCAGACGGCGCATGGT < 2:111322/149‑1 GCAGCATGTCGGTGCGCATGAGCTACCCCACCATGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4117705‑4117855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccggCCAGCTCACCGTAGGGTACGGAACGTCCGGTCGTGGTATGTACTACGTTACCCGGTGTGGTAGAAAGCTCATCGACCGGTACACCCAGGTGTTCGGCGCCCGCCTGCAGCAGCATGCCCCGGGCGAGCGCGCCCAGACGGCGCATGGT < NC_002947/4117881‑4117734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |