New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5926821 = | 38 (0.670) | 3 (0.060) | 3/242 | NT | 7.8% | coding (1074/1623 nt) | PP_5195 | iron ABC transporter permease |
? | NC_002947 | 5926859 = | 35 (0.660) | coding (1036/1623 nt) | PP_5195 | iron ABC transporter permease |
GGCAACGCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGG‑GCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCGCTGCTGCTGGCCTTTGCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5926975‑5926821 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgggCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGAT > NC_002947/5926859‑5927006 GGCAACGCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGG‑GCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCGCTGCTGCTGGCCTTTGCCCGGCGCCAGGCACCGACGGGCGGTATCCGC > 7:84075/1‑149 ACGCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGGTGCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCGCTGCTGCTGGCCTTTGCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCC > 1:287428/1‑149 GCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGG‑GCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCGCTGCTGCTGGCCTTTGCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGG < 7:92390/149‑1 GCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGG‑GCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCGCTGCTGCTGGCCTTTGCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGG > 8:92390/1‑149 TTTGCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGG > 4:156454/1‑149 CCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAA < 5:232390/123‑1 CCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAA > 6:232390/1‑123 CCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCG < 3:323400/149‑1 CGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCACCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGG < 6:209546/149‑1 GGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGG < 1:234948/149‑1 GGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGA < 7:163993/149‑1 GCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCC > 3:348371/1‑110 GCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCC < 4:348371/110‑1 GCAAAGGCCAGCAGCAGCGACACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGTCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGAc < 8:324854/149‑2 GGCAACGCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGG‑GCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCGCTGCTGCTGGCCTTTGCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5926975‑5926821 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgggCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGAT > NC_002947/5926859‑5927006 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |