New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5926821 =	38 (0.670)	3 (0.060)	3/242	NT	7.8%	coding (1074/1623 nt)	PP_5195	iron ABC transporter permease
	?	NC_002947	5926859 =	35 (0.660)					coding (1036/1623 nt)	PP_5195	iron ABC transporter permease

GGCTACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGC  >  NC_002947/5926673‑5926969                                                                                                                                                     |                                                                                                                                                     gtcccgctgctgcagttgctggcgtggttctggcaacgcggacggcatgacctggatgagcgttatatcggcctggtgctgcacaccctgtacctgggcagcatggcggcgctggtcacggtatgcgtgtcgctgctgctggcctttgc                                                                                                                                                      <  8:324854‑M1/1‑1 (MQ=255)  tcccgctgctgcagttgctggcgtggttctggcaacgcggccggcatgacctggatgagcgttatatcggcctggtgctgcacaccctgtacctgggcagcatggcggcgctggtcacggtatgcgtggcgctgctgctggcctttgcc                                                                                                                                                     <  7:163993‑M1/2‑1 (MQ=255)   cccgctgctgcagttgctggcgtggttctggcaacgcggccggcatgacctggatgagcgttatatcggcctggtgctgcacaccctgtacctgggcagcatggcggcgctggtcacggtatgcgtggcgctgctgctggcctttgccc                                                                                                                                                    <  1:234948‑M1/3‑1 (MQ=255)    tACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCg                                                                                                                                                   >  1:270639/1‑149 (MQ=255)    tACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCg                                                                                                                                                   >  4:67032/1‑149 (MQ=255)    ccgctgctgcagttgctggcgtggttctggcaacgcggccggcatgacctggatgagcgttatatcggcctggtgctgcacaccctgtacctgggcagcatggtggcgctggtcacggtatgcgtggcgctgctgctggcctttgCCCg                                                                                                                                                   <  6:209546‑M1/4‑1 (MQ=255)     cgctgctgcagttgctggcgtggttctggcaacgcggccggcatgacctggatgagcgttatatcggcctggtgctgcacaccctgtacctgggcagcatggcggcgctggtcacggtatgcgtggcgctgctgctggcctttgCCCgg                                                                                                                                                  <  3:323400‑M1/5‑1 (MQ=255)        tAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAAccc                                                                                                                                                     >  7:82947/1‑143 (MQ=255)        tAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAAccc                                                                                                                                                     <  8:82947/143‑1 (MQ=255)          gcagcagcGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGcgcg                                                                                                                                              <  4:33616/148‑1 (MQ=255)                         cGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGt                                                                                                                              <  3:67032/149‑1 (MQ=255)                                gccCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGgc                                                                                                                       >  6:284047/1‑149 (MQ=255)                                 cccAGCCAACTGGACAACGGGATGACCAGGTGGGTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATCCCCCAGAGTGGCCCGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGgcg                                                                                                                      >  5:113495/1‑149 (MQ=255)                                      ccAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCggg                                                                                                                 <  2:270639/149‑1 (MQ=255)                                        ggccggcatgacctggatgagcgttatatcggcctggtgctgcacaccctgtacctgggcagcatggcggcgctggtcacggtatgcgtggcgctgctgctggcctttgc                                                                                                                                                      >  3:348371‑M1/110‑110 (MQ=255)                                        ggccggcatgacctggatgagcgttatatcggcctggtgctgcacaccctgtacctgggcagcatggcggcgctggtcacggtatgcgtggcgctgctgctggcctttgc                                                                                                                                                      <  4:348371‑M1/1‑1 (MQ=255)                                          ccggcatgacctggatgagcgttatatcggcctggtgctgcacaccctgtacctgggcagcatggcggcgctggtcacggtatgcgtggcgctgctgctggcctttgCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCaaa                                                                                                             >  4:156454‑M1/108‑149 (MQ=255)                                           tGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCt                                                                                                                          <  8:81378/135‑1 (MQ=255)                                           tGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCt                                                                                                                          >  7:81378/1‑135 (MQ=255)                                             gACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGt                                                                                                                                  >  4:95559/1‑125 (MQ=255)                                             gACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGt                                                                                                                                  <  3:95559/125‑1 (MQ=255)                                               cAACGAGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGc                                                                                                          >  4:56434/1‑147 (MQ=255)                                                aaCGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCcag                                                                                                       >  7:191237/1‑149 (MQ=255)                                                       tGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCagcagcagc                                                                                                <  7:8809/149‑1 (MQ=255)                                                          ccAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAgcgc                                                                                              >  5:28590/1‑148 (MQ=255)                                                          ccAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGcc                                                                                             >  5:33801/1‑149 (MQ=255)                                                           cAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCa                                                                                            >  2:287428/1‑149 (MQ=255)                                                           cAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGACCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCa                                                                                            >  6:24354/1‑149 (MQ=255)                                                               ttatatcggcctggtgctgcacaccctgtacctgggcagcatggcggcgctggtcacggtatgcgtggcgctgctgctggcctttgCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCgg                                                                                                                  <  5:232390‑M1/37‑1 (MQ=255)                                                               ttatatcggcctggtgctgcacaccctgtacctgggcagcatggcggcgctggtcacggtatgcgtggcgctgctgctggcctttgCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCgg                                                                                                                  >  6:232390‑M1/87‑123 (MQ=255)                                                                  ttGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCTAGCAGCAGCGCCACGCATAc                                                                                     <  3:56434/149‑1 (MQ=255)                                                                       gAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGa                                                                                <  8:191237/149‑1 (MQ=255)                                                                                      cAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCAtgc                                                                 >  7:165118/1‑149 (MQ=255)                                                                                       aGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCagcagcagc                                                                                                >  6:160093/1‑117 (MQ=255)                                                                                       aGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCagcagcagc                                                                                                <  5:160093/117‑1 (MQ=255)                                                                                              tCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAgg                                                         >  3:316020/1‑149 (MQ=255)                                                                                                    ccGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAgg                                                   <  6:28590/149‑1 (MQ=255)                                                                                                    ccGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAgg                                                   <  6:33801/149‑1 (MQ=255)                                                                                                        cAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGgtgt                                               >  4:323400/1‑149 (MQ=255)                                                                                                        cAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGgtgt                                               >  6:95211/1‑149 (MQ=255)                                                                                                         aaCACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCACAGGTACAGGGtgtg                                              >  4:237821/1‑149 (MQ=255)                                                                                                          acacCGAACCGGGCAGGGCATACCGCAGATTGGCCAGGGCAACCCCGGCGCGGATACCGCCCGGCGGGGCCTGGCGCCGGGCAAAGGCCCGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTgc                                             <  6:113495/149‑1 (MQ=255)                                                                                                                       cagggcaTACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGa                                <  5:284047/149‑1 (MQ=255)                                                                                                                       cagggcaTACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGa                                <  4:316020/149‑1 (MQ=255)                                                                                                                         gggcaTACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGata                              >  2:234948/1‑149 (MQ=255)                                                                                                                          ggcaTACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGata                              >  5:249207/1‑148 (MQ=255)                                                                                                                           gcaTACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGatat                             >  7:324854/1‑148 (MQ=255)                                                                                                                            caTACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGGCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATaa                           <  5:24354/149‑1 (MQ=255)                                                                                                                              tACCCCAGATTGGCCATGCCAACCCCGGCGCGGATACCGCCCGTCTGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACg                         <  7:270253/149‑1 (MQ=255)                                                                                                                                ccccAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCt                       >  7:153976/1‑149 (MQ=255)                                                                                                                                    aGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATc                   >  8:163993/1‑149 (MQ=255)                                                                                                                                          gccaggccaACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGt              >  8:84075/1‑148 (MQ=255)                                                                                                                                                ccaACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATgccg       <  6:249207/149‑1 (MQ=255)                                                                                                                                                  aaCCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCAt                                                                   <  4:236640/87‑1 (MQ=255)                                                                                                                                                  aaCCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCAt                                                                   >  3:236640/1‑87 (MQ=255)                                                                                                                                                     CCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCcgc  <  7:92390‑M1/149‑1 (MQ=255)                                                                                                                                                     CCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCcgc  >  8:92390‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GGCTACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCGGATACCGCCCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGC  >  NC_002947/5926673‑5926969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.