New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1593948	64 (1.130)	6 (0.110)	4/250	NT	9.3%	intergenic (‑146/+155)	PP_1399/kgtP	hypothetical protein/alpha‑ketoglutarate permease
	?	NC_002947	= 1593994	55 (1.000)					intergenic (‑192/+109)	PP_1399/kgtP	hypothetical protein/alpha‑ketoglutarate permease

ATGGTCGTTGCTCCAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCA  >  NC_002947/1593801‑1594094                                                                                                                                                    |                                                                                                                                                   aTGGTCGTTGCTCCAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAg                                                                                                                                                   >  8:203896/1‑149 (MQ=255)  tGGTCGTTGCTCCAGGGGTTTGTGAGTTGTTTGTTTCTATGTGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAgg                                                                                                                                                  <  5:341916/149‑1 (MQ=255)  tGGTCGTTGCTCCAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAgg                                                                                                                                                  <  7:261343/149‑1 (MQ=255)    gTCGTTGCTCCAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAtggc                                                                                                                                                >  4:44308‑M1/1‑145 (MQ=255)    gTCGTTGCTCCAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAggct                                                                                                                                                <  3:136623/149‑1 (MQ=255)    gTCGTTGCTCCAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAggct                                                                                                                                                >  6:120820/1‑149 (MQ=255)       gTTGCTCCAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAggctggc                                                                                                                                             >  3:271357/1‑149 (MQ=255)           ctgcAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCCCAAAAAATAGTTCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTgg                                                                                                                                         <  7:9649/146‑1 (MQ=255)            tCCAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAggctggcagaac                                                                                                                                        >  1:113134‑M1/1‑137 (MQ=255)              cAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGa                                                                                                                                       <  3:147978/148‑1 (MQ=255)               aGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGAGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGTGAGAGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGTGAGc                                                                                                                                     >  8:140647/1‑149 (MQ=255)                   gTTTGTGAGTTGCTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTc                                                                                                                                 <  6:18706/149‑1 (MQ=255)                                ttgtttCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCaa                                                                                                                    >  1:344351/1‑149 (MQ=255)                                 tgtttCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCaa                                                                                                                    <  6:78909/148‑1 (MQ=255)                                  gtttCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCgg                                                                                                                           >  8:169338/1‑140 (MQ=255)                                  gtttCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCgg                                                                                                                           <  7:169338/140‑1 (MQ=255)                                   tttCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGt                                                                                                                 >  1:109540/1‑149 (MQ=255)                                       tATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTg                                                                                                             >  6:140873/1‑149 (MQ=255)                                        aTGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTgc                                                                                                            >  6:59460/1‑149 (MQ=255)                                                 aTCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccttgc                                                                                                   <  2:113134‑M1/149‑50 (MQ=255)                                                 aTCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttg                                                                                                   >  4:50947‑M2/1‑146 (MQ=255)                                                 aTCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttg                                                                                                   <  5:113331‑M2/149‑4 (MQ=255)                                                 aTCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATACTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccttgc                                                                                                   <  3:153570‑M1/149‑50 (MQ=255)                                                   ccTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAtggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccttgcg                                                                                                 <  3:44308‑M1/149‑52 (MQ=255)                                                   ccTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttg                                                                                                   <  6:192425‑M2/147‑4 (MQ=255)                                                   ccTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttg                                                                                                   <  5:75446‑M2/147‑4 (MQ=255)                                                    cgaccccGAACACTTTTATAAAACAGCGCAAAAAAAAGTGCTCAATAATCCATTTCTTCGATGTATTTGGGCTCGTCTGTCGCGCTTCAGGCCGCAAGCCTGGCTTGGGAGCGTTCGCGCGTGCGCCAACGTGCTGCCAGCCATTGCAg                                                                                                <  4:245331/144‑1 (MQ=255)                                                    cTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAg                                                                                                >  2:31080/1‑149 (MQ=255)                                                       cGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGc                                                                                               <  7:190331/147‑1 (MQ=255)                                                       cGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCtt                                                                                             <  7:203896/149‑1 (MQ=255)                                                       cGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCtt                                                                                             <  1:31080/149‑1 (MQ=255)                                                        gCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCa                                                                                                 >  2:294406/1‑144 (MQ=255)                                                        gCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCAATTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCa                                                                                                 <  1:294406/144‑1 (MQ=255)                                                           gAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGAt                                                                                          >  4:38753/1‑148 (MQ=255)                                                            aataatTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGAt                                                                                          >  8:27334/1‑147 (MQ=255)                                                               aatTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGt                                                                                     <  2:109540/149‑1 (MQ=255)                                                                 tttGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTg                                                                                    >  8:291013/1‑148 (MQ=255)                                                                  ttGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGt                                                                                     <  5:118168/146‑1 (MQ=255)                                                                  ttGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGt                                                                                     >  6:118168/1‑146 (MQ=255)                                                                  ttGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTgg                                                                                   >  5:97585/1‑148 (MQ=255)                                                                    gATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAAt                                                                                >  2:49909/1‑149 (MQ=255)                                                                     aTTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAAt                                                                                <  7:27334/148‑1 (MQ=255)                                                                      ttAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAAtt                                                                               <  5:290156/148‑1 (MQ=255)                                                                       tAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTaa                                                                             >  4:149317/1‑149 (MQ=255)                                                                        aaaaaGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTaa                                                                             <  6:97585/148‑1 (MQ=255)                                                                             gcgcAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGc                                                                       <  5:192425/149‑1 (MQ=255)                                                                             gcgcAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGc                                                                       <  5:59460/149‑1 (MQ=255)                                                                                              aaaTAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTc                                                      >  8:112685/1‑149 (MQ=255)                                                                                               aataatCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGt                                                       <  6:75446/147‑1 (MQ=255)                                                                                               aataatCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTc                                                      <  7:291013/148‑1 (MQ=255)                                                                                               aataatCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCt                                                     <  4:271357/149‑1 (MQ=255)                                                                                                    tCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCTCAATGCTGGCTTGGGAGCTTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATATGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATa                                                <  7:140647/149‑1 (MQ=255)                                                                                                    tCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGaa                                                  >  1:281446/1‑147 (MQ=255)                                                                                                    tCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATa                                                <  6:113331/149‑1 (MQ=255)                                                                                                      cATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGt                                                       <  6:277734/140‑1 (MQ=255)                                                                                                      cATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGt                                                       >  5:277734/1‑140 (MQ=255)                                                                                                            ttCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGaaaa                                                         >  2:213720/1‑132 (MQ=255)                                                                                                            ttCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGaaaa                                                         <  1:213720/132‑1 (MQ=255)                                                                                                              cGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAtggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccttgcggc                                                                                               >  5:321840‑M1/1‑39 (MQ=255)                                                                                                              cGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAtggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccttgcggc                                                                                               <  6:321840‑M1/92‑54 (MQ=255)                                                                                                                   tATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTc                                  <  1:49909/148‑1 (MQ=255)                                                                                                                    aTTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGaa                                                                                 >  2:164869/1‑100 (MQ=255)                                                                                                                    aTTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGaa                                                                                 <  1:164869/100‑1 (MQ=255)                                                                                                                            gcgTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAGTgg                        >  8:107839/1‑149 (MQ=255)                                                                                                                             cgTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATggg                       <  5:120820/149‑1 (MQ=255)                                                                                                                                   tCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAAt                                                                            <  6:296408/90‑1 (MQ=255)                                                                                                                                   tCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAAt                                                                            >  5:296408/1‑90 (MQ=255)                                                                                                                                     gTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCt               >  2:158828/1‑149 (MQ=255)                                                                                                                                        cTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCttt             <  3:38753/148‑1 (MQ=255)                                                                                                                                         ttCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAGCGcc                  >  5:133733/1‑142 (MQ=255)                                                                                                                                         ttCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAGCGcc                  <  6:133733/142‑1 (MQ=255)                                                                                                                                           cAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATg                              >  5:241253/1‑128 (MQ=255)                                                                                                                                           cAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATg                              <  6:241253/128‑1 (MQ=255)                                                                                                                                           cAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAGCGCCCCttttcta         >  2:136018/1‑146 (MQ=39)                                                                                                                                            aGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAGCGCCCCttttcta         <  1:136018/148‑4 (MQ=39)                                                                                                                                             ggCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATTGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCttt             >  5:309741/1‑143 (MQ=255)                                                                                                                                             ggCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCttt             <  6:309741/143‑1 (MQ=255)                                                                                                                                              gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttgcggcctgaagcacgacatacgcgcccaaatacatcg                                                               >  5:321840‑M2/1‑53 (MQ=255)                                                                                                                                              gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttgcggcctgaagcacgacatacgcgcccaaatacatcg                                                               <  6:321840‑M2/92‑40 (MQ=255)                                                                                                                                              gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACt      >  7:246513/1‑149 (MQ=255)                                                                                                                                              gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACt      >  2:96696/1‑149 (MQ=255)                                                                                                                                              gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACt      >  6:295120/1‑149 (MQ=255)                                                                                                                                                cGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtagg    <  3:44308‑M2/149‑99 (MQ=255)                                                                                                                                                 gCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCtgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcagtattttttgcgctttttaatcaaattattcggcgtaggat    <  3:153570‑M2/149‑100 (MQ=255)                                                                                                                                                 gCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCtgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtaggat    <  2:113134‑M2/149‑100 (MQ=255)                                                                                                                                                  cAAtggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccttgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtaggat  <  5:113331‑M1/149‑147 (MQ=255)                                                                                                                                                  cAAtggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccttgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtaggat  >  4:50947‑M1/1‑3 (MQ=255)                                                                                                                                                  cAAtggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccttgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtagg    <  5:75446‑M1/147‑145 (MQ=255)                                                                                                                                                  cAAtggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccttgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtagg    <  6:192425‑M1/147‑145 (MQ=255)                                                                                                                                                  cAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTgc    >  8:220586/1‑147 (MQ=255)                                                                                                                                                    |                                                                                                                                                   ATGGTCGTTGCTCCAGGGGTTTGTGAGTTGTTTGTTTCTATGGGTTTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCA  >  NC_002947/1593801‑1594094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.