New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 159394864 (1.130)6 (0.110) 4/250 NT 9.3% intergenic (‑146/+155) PP_1399/kgtP hypothetical protein/alpha‑ketoglutarate permease
?NC_002947 = 1593994 55 (1.000)intergenic (‑192/+109) PP_1399/kgtP hypothetical protein/alpha‑ketoglutarate permease

TTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCT  >  NC_002947/1593846‑1594139
                                                                                                                                                    |                                                                                                                                                 
cctggcagtactaaaaggggcgccccattgcatggagcgccccttttctattcagacttttccttcttaacgccctattaattccaccttatcaagctgcaatGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTgccagcca                                                                                                                                                   >  3:153280‑M1/104‑149 (MQ=255)
   aTCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttg                                                                                                                                                <  5:113331‑M2/149‑4 (MQ=255)
   aTCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttg                                                                                                                                                >  4:50947‑M2/1‑146 (MQ=255)
     ccTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttg                                                                                                                                                <  5:75446‑M2/147‑4 (MQ=255)
     ccTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttg                                                                                                                                                <  6:192425‑M2/147‑4 (MQ=255)
      cgaccccGAACACTTTTATAAAACAGCGCAAAAAAAAGTGCTCAATAATCCATTTCTTCGATGTATTTGGGCTCGTCTGTCGCGCTTCAGGCCGCAAGCCTGGCTTGGGAGCGTTCGCGCGTGCGCCAACGTGCTGCCAGCCATTGCAg                                                                                                                                             <  4:245331/144‑1 (MQ=255)
      cTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAg                                                                                                                                             >  2:31080/1‑149 (MQ=255)
         cGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGc                                                                                                                                            <  7:190331/147‑1 (MQ=255)
         cGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCtt                                                                                                                                          <  1:31080/149‑1 (MQ=255)
         cGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCtt                                                                                                                                          <  7:203896/149‑1 (MQ=255)
          gCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCa                                                                                                                                              >  2:294406/1‑144 (MQ=255)
          gCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCAATTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCa                                                                                                                                              <  1:294406/144‑1 (MQ=255)
             gAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGAt                                                                                                                                       >  4:38753/1‑148 (MQ=255)
              aataatTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGAt                                                                                                                                       >  8:27334/1‑147 (MQ=255)
                 aatTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGt                                                                                                                                  <  2:109540/149‑1 (MQ=255)
                   tttGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTg                                                                                                                                 >  8:291013/1‑148 (MQ=255)
                    ttGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGt                                                                                                                                  <  5:118168/146‑1 (MQ=255)
                    ttGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGt                                                                                                                                  >  6:118168/1‑146 (MQ=255)
                    ttGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTgg                                                                                                                                >  5:97585/1‑148 (MQ=255)
                      gATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAAt                                                                                                                             >  2:49909/1‑149 (MQ=255)
                       aTTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAAt                                                                                                                             <  7:27334/148‑1 (MQ=255)
                        ttAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAAtt                                                                                                                            <  5:290156/148‑1 (MQ=255)
                         tAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTaa                                                                                                                          >  4:149317/1‑149 (MQ=255)
                          aaaaaGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTaa                                                                                                                          <  6:97585/148‑1 (MQ=255)
                              catggagcgccccttttctattcagacttttccttcttaacgccctattaattccaccttatcaagctgcaatGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGt                                                                                                                                  <  5:347036‑M1/63‑1 (MQ=255)
                              catggagcgccccttttctattcagacttttccttcttaacgccctattaattccaccttatcaagctgcaatGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGt                                                                                                                                  >  6:347036‑M1/74‑136 (MQ=255)
                               gcgcAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGc                                                                                                                    <  5:59460/149‑1 (MQ=255)
                               gcgcAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGc                                                                                                                    <  5:192425/149‑1 (MQ=255)
                                                aaaTAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTc                                                                                                   >  8:112685/1‑149 (MQ=255)
                                                 aataatCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGt                                                                                                    <  6:75446/147‑1 (MQ=255)
                                                 aataatCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTc                                                                                                   <  7:291013/148‑1 (MQ=255)
                                                 aataatCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCt                                                                                                  <  4:271357/149‑1 (MQ=255)
                                                      tCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCTCAATGCTGGCTTGGGAGCTTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATATGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATa                                                                                             <  7:140647/149‑1 (MQ=255)
                                                      tCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGaa                                                                                               >  1:281446/1‑147 (MQ=255)
                                                      tCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATa                                                                                             <  6:113331/149‑1 (MQ=255)
                                                        cATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGt                                                                                                    >  5:277734/1‑140 (MQ=255)
                                                        cATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGt                                                                                                    <  6:277734/140‑1 (MQ=255)
                                                              ttCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGaaaa                                                                                                      <  1:213720/132‑1 (MQ=255)
                                                              ttCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGaaaa                                                                                                      >  2:213720/1‑132 (MQ=255)
                                                                     tATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTc                                                                               <  1:49909/148‑1 (MQ=255)
                                                                      aTTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGaa                                                                                                                              <  1:164869/100‑1 (MQ=255)
                                                                      aTTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGaa                                                                                                                              >  2:164869/1‑100 (MQ=255)
                                                                              gcgTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAGTgg                                                                     >  8:107839/1‑149 (MQ=255)
                                                                               cgTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATggg                                                                    <  5:120820/149‑1 (MQ=255)
                                                                                     tCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAAt                                                                                                                         >  5:296408/1‑90 (MQ=255)
                                                                                     tCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAAt                                                                                                                         <  6:296408/90‑1 (MQ=255)
                                                                                     accttatcaagctgcaatggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATg                                                                           <  5:347036‑M2/73‑1 (MQ=255)
                                                                                     accttatcaagctgcaatggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATg                                                                           >  6:347036‑M2/64‑136 (MQ=255)
                                                                                       gTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCt                                                            >  2:158828/1‑149 (MQ=255)
                                                                                          cTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCttt                                                          <  3:38753/148‑1 (MQ=255)
                                                                                           ttCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAGCGcc                                                               <  6:133733/142‑1 (MQ=255)
                                                                                           ttCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAGCGcc                                                               >  5:133733/1‑142 (MQ=255)
                                                                                             cAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATg                                                                           <  6:241253/128‑1 (MQ=255)
                                                                                             cAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATg                                                                           >  5:241253/1‑128 (MQ=255)
                                                                                             cAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAGCGCCCCttttcta                                                      >  2:136018/1‑146 (MQ=39)
                                                                                              aGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCCCCATTGCATGGAGCGCCCCttttcta                                                      <  1:136018/148‑4 (MQ=39)
                                                                                               ggCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATTGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCttt                                                          >  5:309741/1‑143 (MQ=255)
                                                                                               ggCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCttt                                                          <  6:309741/143‑1 (MQ=255)
                                                                                                gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttgcggcctgaagcacgacatacgcgcccaaatacatcg                                                                                                            <  6:321840‑M2/92‑40 (MQ=255)
                                                                                                gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttgcggcctgaagcacgacatacgcgcccaaatacatcg                                                                                                            >  5:321840‑M2/1‑53 (MQ=255)
                                                                                                gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACt                                                   >  6:295120/1‑149 (MQ=255)
                                                                                                gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACt                                                   >  2:96696/1‑149 (MQ=255)
                                                                                                gCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACt                                                   >  7:246513/1‑149 (MQ=255)
                                                                                                  cGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCAttgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtagg                                                 <  3:44308‑M2/149‑99 (MQ=255)
                                                                                                   gCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCtgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcagtattttttgcgctttttaatcaaattattcggcgtaggat                                                 <  3:153570‑M2/149‑100 (MQ=255)
                                                                                                   gCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCtgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtaggat                                                 <  2:113134‑M2/149‑100 (MQ=255)
                                                                                                    cAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTgc                                                 >  8:220586/1‑147 (MQ=255)
                                                                                                      tggctggcagaacgttggcgcccgcgcgaacgctcccaagccagccATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTgccagg                                             >  3:153280‑M2/47‑149 (MQ=255)
                                                                                                        GCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAg                                                                                            <  2:158297‑M1/100‑1 (MQ=255)
                                                                                                        GCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAg                                                                                            >  1:158297‑M1/1‑100 (MQ=255)
                                                                                                            GCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATAAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGc                                        >  2:344351‑M1/1‑148 (MQ=255)
                                                                                                              ttGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGt                                      >  7:245388/1‑148 (MQ=255)
                                                                                                                    gCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAg                               <  5:295120/149‑1 (MQ=255)
                                                                                                                     cGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGt                              <  7:220586/149‑1 (MQ=255)
                                                                                                                     cGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGt                              <  7:112685/149‑1 (MQ=255)
                                                                                                                      gTTCGCGCGGGCGCCAACGATCTGCCAGACATTGCAGCTTGATAAGGTGGAATTATTAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCTCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTg                             <  6:82339/149‑1 (MQ=255)
                                                                                                                                    cAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGt                >  7:84319/1‑148 (MQ=255)
                                                                                                                                        gTTCTGCCAGCCtgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtaggattaaacccatagaaacaaacaactcacaaacccctgga            >  1:113134‑M2/1‑13 (MQ=255)
                                                                                                                                           cTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTa                                    >  7:324266/1‑121 (MQ=255)
                                                                                                                                           cTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTa                                    <  8:324266/121‑1 (MQ=255)
                                                                                                                                            tGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTgg       >  4:140746/1‑149 (MQ=255)
                                                                                                                                                 gccattgcggcctgaagcacgacatacgcgcccaaatacatcgaacaaatggattatttagcactattttttgcgctttttaatcaaattattcggcgtaggattaaacccatagaaacaaacaactcacaaacccctggagcaacgac  >  4:44308‑M2/1‑4 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
TTAATCCTACGCCGAATAATTTGATTAAAAAGCGCAAAAAATAGTGCTAAATAATCCATTTGTTCGATGTATTTGGGCGCGTATGTCGTGCTTCAGGCCGCAAGGCTGGCTTGGGAGCGTTCGCGCGGGCGCCAACGTTCTGCCAGCCATTGCAGCTTGATAAGGTGGAATTAATAGGGCGTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCT  >  NC_002947/1593846‑1594139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.