New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1976704 =	67 (1.180)	4 (0.070)	4/248	NT	6.9%	coding (368/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase
	?	NC_002947	1976760 =	44 (0.810)					coding (424/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase

GATGTCATCCAGCTGGCCGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGAAACCGACCCCGCCGCGCTGGTCCTGGTTGAC  >  NC_002947/1976559‑1976852                                                                                                                                                  |                                                                                                                                                      ggcgctcgaccgacatgtgctccacatcggcgtccagcgcacgccacaggcggtcaaccaggaccagcgcggcggggtcggtttcggccagcggcgtgaggatgaccttgtgccggcggaacaaggtggcattggacgcctctacCCCg                                                                                                                                                    <  1:337318‑M1/4‑1 (MQ=255)     tCATCCAGCTGGCCGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTg                                                                                                                                                <  2:347864/149‑1 (MQ=255)        tCCAGCTGGCCGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCcg                                                                                                                                             >  3:164600/1‑149 (MQ=255)        tCCAGCTGGCCGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCcg                                                                                                                                             >  6:311122/1‑149 (MQ=255)         ccAGCTGGCCGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCcgc                                                                                                                                            >  3:131820/1‑149 (MQ=255)           aGCTGGCCGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCgcgc                                                                                                                                          >  5:267775/1‑149 (MQ=255)            gCTGGCCGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCt                                                                                                                                         >  7:101996/1‑149 (MQ=255)                gCCGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGt                                                                                                                                     >  8:16392/1‑149 (MQ=255)                 ccGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTc                                                                                                                                    >  6:49762/1‑149 (MQ=255)                   gTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGATCGACCTGGGAGATGCAATCATAACCGACGTCGGCAGCCCCAACGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTCCCCGCCTGCCGCGCTTCCTccc                                                                                                                                  >  3:203046/1‑149 (MQ=255)                     aCCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCgg                                                                                                                                >  4:265643/1‑149 (MQ=255)                     aCCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCgg                                                                                                                                <  7:7900/149‑1 (MQ=255)                     aCCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCgg                                                                                                                                <  4:262560/149‑1 (MQ=255)                      ccGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCTGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCgg                                                                                                                                <  6:267775/148‑1 (MQ=255)                      ccGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCgg                                                                                                                                <  3:265643/148‑1 (MQ=255)                       cGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGc                                                                                                                              <  8:101996/149‑1 (MQ=255)                            cTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCAccc                                                                                                                         <  8:329926/149‑1 (MQ=255)                                 cATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCg                                                                                                                    >  4:307532/1‑149 (MQ=255)                                  aTGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGc                                                                                                                   >  5:231409/1‑149 (MQ=255)                                    ggAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCg                                                                                                                 >  2:89653/1‑149 (MQ=255)                                     gAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCg                                                                                                                 <  5:311122/148‑1 (MQ=255)                                     gAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCg                                                                                                                 <  1:54126/148‑1 (MQ=255)                                      aaaaaGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCgg                                                                                                                <  3:205569/148‑1 (MQ=255)                                      aaaaaGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGt                                                                                                               >  7:184352/1‑149 (MQ=255)                                       cacgccacaggcggtcaaccaggaccagcgcggcaggggtcggtttcggccagcggcgtgaggatgaccatgtgccggcggaacaaggtggcattggacgcctctacCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGtt                                                                                                              <  1:235787‑M1/42‑1 (MQ=255)                                       aaaaGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGtt                                                                                                              >  6:151669/1‑149 (MQ=255)                                       aaaaGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGtt                                                                                                              <  3:49635/149‑1 (MQ=255)                                           gTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGa                                                                                                          <  7:16392/149‑1 (MQ=255)                                                cgcgcgCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCa                                                                                                      >  2:294369/1‑147 (MQ=255)                                                 gcgcgcCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCagag                                                                                                   >  3:265847/1‑149 (MQ=255)                                                   gcgcCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCg                                                                                                 <  4:265847/149‑1 (MQ=255)                                                    ggtcaaccatgaccagcgcggcggggtcggtttcggccagcggcgtgaggatgacgttgtgccggcggaacaaggtggcattggacgcctctacCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCgg                                                                                                >  2:235787‑M1/95‑149 (MQ=255)                                                     gcCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCggg                                                                                               <  5:49762/149‑1 (MQ=255)                                                      ccTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCgggg                                                                                              <  2:305559/149‑1 (MQ=255)                                                       cTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCgggg                                                                                              >  4:183475/1‑148 (MQ=255)                                                         ggCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCgggg                                                                                              >  5:12537/1‑146 (MQ=255)                                                          gCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTa                                                                                            <  4:131820/147‑1 (MQ=255)                                                          gCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTa                                                                                            <  7:31339/147‑1 (MQ=255)                                                            ccTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCCTCGCCGGTTCCGA‑GCAGAGCTGGGTAGAgg                                                                                        >  3:37273/1‑149 (MQ=255)                                                                cTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTc                                                                                    >  2:243114/1‑149 (MQ=255)                                                                   gACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCaa                                                                                 <  3:183475/149‑1 (MQ=255)                                                                    aCCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAAt                                                                                <  4:42358/149‑1 (MQ=255)                                                                    aCCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAAt                                                                                <  1:294369/149‑1 (MQ=255)                                                                        gggTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTc                                                                                                                                       <  8:241090/91‑1 (MQ=255)                                                                        gggTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTc                                                                                                                                       >  7:241090/1‑91 (MQ=255)                                                                               gCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGtt                                                                     >  6:223679/1‑149 (MQ=255)                                                                                   tcatcaCCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTccgc                                                                 >  5:59299/1‑149 (MQ=255)                                                                                      tcaCCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTg                                                                       >  5:238144/1‑140 (MQ=255)                                                                                      tcaCCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTg                                                                       <  6:238144/140‑1 (MQ=255)                                                                                      ggccagcggcgtgaggatgaccttgtgccggcggaacaaggtggcattggacgcctctacCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCggg                                                                                               <  1:356022‑M1/56‑1 (MQ=255)                                                                                      ggccagcggcgtgaggatgaccttgtgccggcggaacaaggtggcattggacgcctctacCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCggg                                                                                               >  2:356022‑M1/61‑116 (MQ=255)                                                                                       caCCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTccgcc                                                                <  6:88123/146‑1 (MQ=255)                                                                                       caCCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTccgcc                                                                >  5:88123/1‑146 (MQ=255)                                                                                         ccGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGca                                                            >  5:78841/1‑148 (MQ=255)                                                                                          cGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTACAGGCGGCCAAAGCAACCGTGTTCCGCCGGccca                                                          >  4:203047/1‑149 (MQ=255)                                                                                                 ggCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGACGCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTc                                                     <  1:89653/148‑1 (MQ=255)                                                                                                  gCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATc                                                  <  2:185161/149‑1 (MQ=255)                                                                                                  gCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATc                                                  >  2:189389/1‑149 (MQ=255)                                                                                                     gcgcCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCt                                                >  5:155057/1‑148 (MQ=255)                                                                                                       gcCTAGGGCAACGGCGTGCGTGAGGCGCGTGCCGTCTTCGGTGAGCGCCTGCCGCGCTTCGTCCCGGGCCAGCGCATCGCCGGTTCCGA‑GCAGTGCGGGGTATAGGCGTCCAATTCCAGCTTGTTCCTCCGGCACAAGGTCATCCTCAc                                             <  4:203046/149‑1 (MQ=255)                                                                                                       gcCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCAc                                             <  6:155057/149‑1 (MQ=255)                                                                                                       gcCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCAc                                             >  2:195560/1‑149 (MQ=255)                                                                                                         cAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCAcgc                                           <  3:307532/149‑1 (MQ=255)                                                                                                           aGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCAcgccg                                         >  3:274554/1‑149 (MQ=255)                                                                                                             ggCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCt                                       <  1:195560/149‑1 (MQ=255)                                                                                                                      gtgcgtgAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGaaa                               <  5:151669/148‑1 (MQ=255)                                                                                                                      gtgcgtgAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGaaa                               <  4:338915/148‑1 (MQ=255)                                                                                                                         cgtgAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGAAACCGa                           <  1:243114/149‑1 (MQ=255)                                                                                                                          gtgAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGAAACCGAc                          <  6:231409/149‑1 (MQ=255)                                                                                                                              ggCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGAAACCGACCccg                      >  4:268450/1‑149 (MQ=255)                                                                                                                                     gCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTcc                                                                                   >  6:369820/1‑81 (MQ=255)                                                                                                                                     gCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTcc                                                                                   <  5:369820/81‑1 (MQ=255)                                                                                                                                              ggTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGAAACCGACCCCGCCGCGCTGGTCCTgg       <  8:184352/148‑1 (MQ=255)                                                                                                                                                tGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGC‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGAAACCGACCCCGCCGCGCTGGTCCTGGtt     >  5:274316/1‑148 (MQ=255)                                                                                                                                                  CCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGAAACCGACCCCGCCGCGCTGGTCCTGGTTGa   >  5:223679‑M1/1‑148 (MQ=255)                                                                                                                                                  CCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGAAACCGACCCCGCCGCGCTGGTCCTGGTTGAc  <  5:350584‑M1/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      GATGTCATCCAGCTGGCCGTACCGATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAACGTCGTGCGTGAGGCGCGTGCCGTCTTCGGTGCCCGCCTGCCGCGCTTCGTCCCGGGCCACCCCATCGCCGGTTCCGA‑GCAGAGCGGGGTAGAGGCGTCCAATGCCACCTTGTTCCGCCGGCACAAGGTCATCCTCACGCCGCTGGCCGAAACCGACCCCGCCGCGCTGGTCCTGGTTGAC  >  NC_002947/1976559‑1976852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.