New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2982409 =	50 (0.880)	3 (0.060)	3/246	NT	5.8%	coding (770/810 nt)	PP_2608	shikimate dehydrogenase family protein
	?	NC_002947	2982442 =	49 (0.910)					coding (737/810 nt)	PP_2608	shikimate dehydrogenase family protein

CCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCG  >  NC_002947/2982267‑2982555                                                                                                                                                  |                                                                                                                                                    gcatgggcacccgcgcagagctgccgttgtccgccgccctgctggctaccctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGc                                                                                                                                                  >  4:283077‑M1/146‑149 (MQ=255)  cACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTAAGATCTCCAACCGTGTGACGCCCAAGAAGGCGCCAAGGTGGCCCac                                                                                                                                              >  6:109349/1‑148 (MQ=255)  cACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGCGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAg                                                                                                                                              >  5:355163/1‑149 (MQ=255)  cACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGGTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCGCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAg                                                                                                                                              >  3:85972/1‑149 (MQ=255)   aCGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGCA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAACGTGGCCCAGt                                                                                                                                             >  5:6931/1‑149 (MQ=255)      gcggGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTgg                                                                                                                                          <  4:75589/149‑1 (MQ=255)            cgcgGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAg                                                                                                                                    <  2:136662/149‑1 (MQ=255)            cgcgGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGGCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGGGCCAAGGTGGCCCAGTTGGGCGAAg                                                                                                                                    <  5:109349/149‑1 (MQ=255)                 tGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCAt                                                                                                                               <  4:236454/149‑1 (MQ=255)                      gcagcggcaAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGCGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCg                                                                                                                          <  6:355163/149‑1 (MQ=255)                       gagcgggaAAAACAACGGGACCGCTTCCGAGGATAATCATGTCGAATTTACCGTTGTGTGTGTGCTCCAGACGCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTc                                                                                                                            <  1:115987/148‑1 (MQ=255)                            gcaAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAg                                                                                                                    >  2:13428/1‑149 (MQ=255)                                cgccgccctgctggctaccctgcagccagacaccccggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGcc                                                                                                                                                 <  6:143901‑M1/5‑1 (MQ=255)                                cgccgccctgctggctaccctgcagccagacaccccggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGcc                                                                                                                                                 >  5:143901‑M1/115‑119 (MQ=255)                                 gccgccctgctggctaccctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTc                                                                                                                  >  5:244206‑M1/114‑149 (MQ=255)                                   caccGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGAt                                                                                                             <  6:159795/149‑1 (MQ=255)                                    accGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGCGCGAAGGCCATTTCCGGGCCAGTCTGGATc                                                                                                            <  6:6931/149‑1 (MQ=255)                                       ggCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTg                                                                                                         <  1:13428/149‑1 (MQ=255)                                          aCCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCaa                                                                                                      >  4:267760/1‑149 (MQ=255)                                           ccGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGCCGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAAc                                                                                                     <  6:58398/149‑1 (MQ=255)                                               tGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑Ac                                                                                                >  4:132313/1‑149 (MQ=255)                                                           agacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCa                                                                                                                     >  4:331900‑M1/88‑120 (MQ=255)                                                           agacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCa                                                                                                                     <  3:331900‑M1/33‑1 (MQ=255)                                                                  gAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTcag                                                                              >  6:11340/1‑148 (MQ=255)                                                                         cTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCg                                                                         >  7:68352/1‑149 (MQ=255)                                                                         cTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCg                                                                         >  7:73232/1‑149 (MQ=255)                                                                         cTGTTGTGTGTGTGCTCCAGAGGCGTCATGGCTTCACATCTCCAACGGTGTGACGCCCATGCAGGCGCCAAGGGGGCCCAGTTGGGCGAAGGCCATTTCCGGCCCAGTCTGGATCCTGCAACCTAACTTGCCGCGCGCGGTTCagcagc                                                                          <  7:225125/149‑1 (MQ=255)                                                                          tgttgtGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCgg                                                                        >  1:867/1‑149 (MQ=255)                                                                            ttgtGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCggg                                                                       <  3:267760/148‑1 (MQ=255)                                                                            ttgtGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCggg                                                                       <  7:97594/148‑1 (MQ=255)                                                                            ttgtGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCggg                                                                       <  5:11340/148‑1 (MQ=255)                                                                               tgtgtgtgCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTg                                                                    <  3:157632/148‑1 (MQ=255)                                                                               tgtgtgtgCTCCAGAGTCGTCATGGCTTCAGAGCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTg                                                                    <  4:85972/148‑1 (MQ=255)                                                                                 tgtgtgCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGAtc                                                                 >  8:278730/1‑149 (MQ=255)                                                                                        tCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggt                                                           >  7:245988/1‑148 (MQ=255)                                                                                                   cATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACg                                               >  8:67174/1‑149 (MQ=255)                                                                                                      ggCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCg                                            >  1:330640/1‑149 (MQ=255)                                                                                                         ttCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag                                                        <  3:154078/134‑1 (MQ=255)                                                                                                         ttCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag                                                        >  4:154078/1‑134 (MQ=255)                                                                                                         ttCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCg                                         >  2:36644/1‑149 (MQ=255)                                                                                                           cAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGa                                        <  7:67174/148‑1 (MQ=255)                                                                                                           cAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGa                                        <  7:278730/148‑1 (MQ=255)                                                                                                           cAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGGGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGa                                        <  2:136562/148‑1 (MQ=255)                                                                                                                    aaCGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTc                              <  3:132313/149‑1 (MQ=255)                                                                                                                      cGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTg                            >  1:302119/1‑149 (MQ=255)                                                                                                                       ggTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTgg                           <  8:12721/149‑1 (MQ=255)                                                                                                                       ggTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTgg                           >  7:12721/1‑149 (MQ=255)                                                                                                                       ggTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTgg                           <  2:330640/149‑1 (MQ=255)                                                                                                                               gCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAggg                   >  5:56475/1‑149 (MQ=255)                                                                                                                                 ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAggg                   >  1:36032/1‑147 (MQ=255)                                                                                                                                  cATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAggg                   >  6:247165/1‑146 (MQ=255)                                                                                                                                  cATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTa                 <  5:247165/148‑1 (MQ=255)                                                                                                                                        ggCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAgg                                   <  1:266359/124‑1 (MQ=255)                                                                                                                                        ggCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAgg                                   >  2:266359/1‑124 (MQ=255)                                                                                                                                           gcCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTcagc                                                                             >  6:275192/1‑79 (MQ=255)                                                                                                                                           gcCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTcagc                                                                             <  5:275192/79‑1 (MQ=255)                                                                                                                                             cAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcg     <  8:68352/149‑1 (MQ=255)                                                                                                                                             cAAGGTGGCCCAGTGGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcg     <  8:73232/149‑1 (MQ=255)                                                                                                                                                ggTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGgcggcg  <  2:867/149‑1 (MQ=255)                                                                                                                                                 gTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGgcggcg  >  6:38074/1‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAA‑‑‑GCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCG  >  NC_002947/2982267‑2982555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.