New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2982409 =	50 (0.880)	3 (0.060)	3/246	NT	5.8%	coding (770/810 nt)	PP_2608	shikimate dehydrogenase family protein
	?	NC_002947	2982442 =	49 (0.910)					coding (737/810 nt)	PP_2608	shikimate dehydrogenase family protein

GCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCGGGTGCCCATGC  >  NC_002947/2982294‑2982586                                                                                                                                                     |                                                                                                                                                  gcaAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAg                                                                                                                                                   >  2:13428/1‑149 (MQ=255)   gccgccctgctggctaccctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTc                                                                                                                                                 >  5:244206‑M1/114‑149 (MQ=255)        caccGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGAt                                                                                                                                            <  6:159795/149‑1 (MQ=255)         accGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGCGCGAAGGCCATTTCCGGGCCAGTCTGGATc                                                                                                                                           <  6:6931/149‑1 (MQ=255)            ggCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTg                                                                                                                                        <  1:13428/149‑1 (MQ=255)               aCCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCaa                                                                                                                                     >  4:267760/1‑149 (MQ=255)                ccGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGCCGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAAc                                                                                                                                    <  6:58398/149‑1 (MQ=255)                    tGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑Ac                                                                                                                               >  4:132313/1‑149 (MQ=255)                                       gAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTcag                                                                                                             >  6:11340/1‑148 (MQ=255)                                           cTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCg                                                                                                        >  7:68352/1‑149 (MQ=255)                                           cTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCg                                                                                                        >  7:73232/1‑149 (MQ=255)                                           cTGTTGTGTGTGTGCTCCAGAGGCGTCATGGCTTCACATCTCCAACGGTGTGACGCCCATGCAGGCGCCAAGGGGGCCCAGTTGGGCGAAGGCCATTTCCGGCCCAGTCTGGATCCTGCAACCTAACTTGCCGCGCGCGGTTCagcagc                                                                                                         <  7:225125/149‑1 (MQ=255)                                            tgttgtGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCgg                                                                                                       >  1:867/1‑149 (MQ=255)                                              ttgtGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCggg                                                                                                      <  5:11340/148‑1 (MQ=255)                                              ttgtGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCggg                                                                                                      <  3:267760/148‑1 (MQ=255)                                              ttgtGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCggg                                                                                                      <  7:97594/148‑1 (MQ=255)                                                 tgtgtgtgCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTg                                                                                                   <  3:157632/148‑1 (MQ=255)                                                 tgtgtgtgCTCCAGAGTCGTCATGGCTTCAGAGCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTg                                                                                                   <  4:85972/148‑1 (MQ=255)                                                   tgtgtgCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGAtc                                                                                                >  8:278730/1‑149 (MQ=255)                                                          tCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggt                                                                                          >  7:245988/1‑148 (MQ=255)                                                                     cATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACg                                                                              >  8:67174/1‑149 (MQ=255)                                                                        ggCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCg                                                                           >  1:330640/1‑149 (MQ=255)                                                                           ttCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag                                                                                       <  3:154078/134‑1 (MQ=255)                                                                           ttCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag                                                                                       >  4:154078/1‑134 (MQ=255)                                                                           ttCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCg                                                                        >  2:36644/1‑149 (MQ=255)                                                                             cAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGa                                                                       <  7:67174/148‑1 (MQ=255)                                                                             cAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGa                                                                       <  7:278730/148‑1 (MQ=255)                                                                             cAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGGGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGa                                                                       <  2:136562/148‑1 (MQ=255)                                                                                      aaCGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTc                                                             <  3:132313/149‑1 (MQ=255)                                                                                        cGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTg                                                           >  1:302119/1‑149 (MQ=255)                                                                                         ggTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTgg                                                          >  7:12721/1‑149 (MQ=255)                                                                                         ggTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTgg                                                          <  8:12721/149‑1 (MQ=255)                                                                                         ggTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTgg                                                          <  2:330640/149‑1 (MQ=255)                                                                                                 gCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAggg                                                  >  5:56475/1‑149 (MQ=255)                                                                                                   ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAggg                                                  >  1:36032/1‑147 (MQ=255)                                                                                                    cATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAggg                                                  >  6:247165/1‑146 (MQ=255)                                                                                                    cATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTa                                                <  5:247165/148‑1 (MQ=255)                                                                                                          ggCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAgg                                                                  <  1:266359/124‑1 (MQ=255)                                                                                                          ggCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAgg                                                                  >  2:266359/1‑124 (MQ=255)                                                                                                             gcCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTcagc                                                                                                            <  5:275192/79‑1 (MQ=255)                                                                                                             gcCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTcagc                                                                                                            >  6:275192/1‑79 (MQ=255)                                                                                                               cAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcg                                    <  8:68352/149‑1 (MQ=255)                                                                                                               cAAGGTGGCCCAGTGGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcg                                    <  8:73232/149‑1 (MQ=255)                                                                                                                 gactggcccggaaatggccttcgcccaactgggccaGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcggc                                  >  5:244206‑M2/37‑149 (MQ=255)                                                                                                                  ggTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGgcggcg                                 <  2:867/149‑1 (MQ=255)                                                                                                                   gTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGgcggcg                                 >  6:38074/1‑148 (MQ=255)                                                                                                                    tggcccggaaatggccttcgcccaactgggccaGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCt                                                            >  4:331900‑M2/34‑120 (MQ=255)                                                                                                                    tggcccggaaatggccttcgcccaactgggccaGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCt                                                            <  3:331900‑M2/87‑1 (MQ=255)                                                                                                                       CCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACaa                            >  2:302119‑M1/1‑149 (MQ=255)                                                                                                                        CCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAAc                           <  3:270414‑M1/149‑1 (MQ=255)                                                                                                                        CCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAAc                           >  8:245988‑M1/1‑149 (MQ=255)                                                                                                                          aGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCgg                                                                                            <  7:125279/82‑1 (MQ=255)                                                                                                                          aGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCgg                                                                                            >  8:125279/1‑82 (MQ=255)                                                                                                                                     ggCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTgcgc              >  2:176744/1‑149 (MQ=255)                                                                                                                                        cATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCggg           >  2:177720/1‑149 (MQ=255)                                                                                                                                         aTTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACg                          <  7:321990/133‑1 (MQ=255)                                                                                                                                         aTTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACg                          >  8:321990/1‑133 (MQ=255)                                                                                                                                              cGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCGGGTGCCCa     >  1:249762/1‑149 (MQ=255)                                                                                                                                                ggccaGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCGGGGTGTCTGGCTGCAGGGTAGCCAGCAGGgcggcg                                 >  5:143901‑M2/6‑119 (MQ=255)                                                                                                                                                ggccaGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCGGGGTGTCTGGCTGCAGGGTAGCCAGCAGGgcggcg                                 <  6:143901‑M2/114‑1 (MQ=255)                                                                                                                                                 gccaGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCGGGTGCCCATGc  >  4:283077‑M2/5‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCT‑ACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCGGGTGCCCATGC  >  NC_002947/2982294‑2982586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.