New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 421821562 (1.100)3 (0.060) 3/242 NT 5.1% coding (1082/1500 nt) PP_3698 hypothetical protein
?NC_002947 = 4218256 53 (1.000)coding (1041/1500 nt) PP_3698 hypothetical protein

GCGGTCGAGTCCGTCAAATGATTGCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGAC  >  NC_002947/4218067‑4218360
                                                                                                                                                    |                                                                                                                                                  
gcgGTCGAGTCCGTCAAATGATTGCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCCTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCA                                                                                                                                                    >  8:9784‑M1/1‑149 (MQ=255)
       aGTCCGTCAAATGATTGCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCCTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAAc                                                                                                                                             <  7:9784/149‑1 (MQ=255)
            gTCAAATGATTGCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCggag                                                                                                                                        <  7:320250/149‑1 (MQ=255)
            gTCAAATGATTGCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCggag                                                                                                                                        <  3:102292/149‑1 (MQ=255)
             tCAAATGATTGCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCggag                                                                                                                                        >  7:1154/1‑148 (MQ=255)
                 aTGATTGCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATg                                                                                                                                   <  1:228438/149‑1 (MQ=255)
                  tGATTGCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATgg                                                                                                                                  <  1:197171/149‑1 (MQ=255)
                       gCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTAc                                                                                                                              <  4:96299/148‑1 (MQ=255)
                        ccAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGCCGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGCGTACCg                                                                                                                            >  8:326929/1‑149 (MQ=255)
                          aGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGc                                                                                                                          <  1:171500/149‑1 (MQ=255)
                                 gTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGcc                                                                                                                   >  5:317793/1‑149 (MQ=255)
                                     tCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGAt                                                                                                               >  4:347856/1‑149 (MQ=255)
                                     tCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGAt                                                                                                               >  1:8835/1‑149 (MQ=255)
                                     tCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGAt                                                                                                               >  8:200425/1‑149 (MQ=255)
                                             ctctAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCTGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggc                                                                                                       >  2:271685‑M2/1‑145 (MQ=255)
                                             ctctAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGcc                                                                                                           <  1:336839/145‑1 (MQ=255)
                                             ctctAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtgg                                                                                                        >  6:317793‑M2/1‑145 (MQ=255)
                                             ctctAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtg                                                                                                         >  6:47667‑M2/1‑145 (MQ=255)
                                                   gTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGcc                                                                                                 <  3:170711/149‑1 (MQ=255)
                                                     cAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCAggcgatcaggcgtacgccggtacccattcctccggttggtatggcgctgtttg                                                                                               <  2:330333‑M1/149‑54 (MQ=255)
                                                      aGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAAt                                                                                              <  2:8835/149‑1 (MQ=255)
                                                        ccGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATg                                                                                                                                   >  7:331898/1‑110 (MQ=255)
                                                        ccGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATg                                                                                                                                   <  8:331898/110‑1 (MQ=255)
                                                          ggACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGAt                                                                                          >  1:337724/1‑149 (MQ=255)
                                                            aCGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGc                                                                                                            <  3:261294/129‑1 (MQ=255)
                                                            aCGCGGTGTCAGATCCAGAGTTCGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGc                                                                                                            >  4:261294/1‑129 (MQ=255)
                                                              gcgGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggc                                                                                                       >  3:333686‑M2/1‑128 (MQ=255)
                                                              gcgGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggc                                                                                                       <  4:333686‑M2/132‑5 (MQ=255)
                                                                 gtgtCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAAt                                                                                   <  7:232615/149‑1 (MQ=255)
                                                                   gtCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtg                                                                                                         >  2:348095‑M2/1‑123 (MQ=255)
                                                                   gtCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtg                                                                                                         <  1:348095‑M2/125‑3 (MQ=255)
                                                                    tCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGc                                                                                 >  3:270499/1‑148 (MQ=255)
                                                                      aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCAggcgatcaggcgtacgccggtacccattcctccggttggtatggcgctgtttggg                                                                                             <  7:323374‑M1/134‑56 (MQ=255)
                                                                      aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCAggcgatcaggcgtacgccggtacccattcctccgggtggtatggcgcgggttggg                                                                                             >  8:323374‑M1/1‑79 (MQ=255)
                                                                      aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTATCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAAt                                                                                   <  6:285937/144‑1 (MQ=255)
                                                                      aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTATCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAAt                                                                                   >  5:285937/1‑144 (MQ=255)
                                                                      aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAAt                                                                                              <  8:38719/133‑1 (MQ=255)
                                                                      aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAAt                                                                                              >  7:38719/1‑133 (MQ=255)
                                                                      aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCaa                                                                              >  1:264504/1‑149 (MQ=255)
                                                                            agagTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCaa                                                                        <  2:264504/149‑1 (MQ=255)
                                                                            agagTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCa                                                                         >  2:311351/1‑148 (MQ=255)
                                                                            agagTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCa                                                                         >  8:77289/1‑148 (MQ=255)
                                                                              agTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCaaa                                                                       >  4:128039/1‑148 (MQ=255)
                                                                                   gcgcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCa                                                                <  8:1154/149‑1 (MQ=255)
                                                                                   gcgcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACAGGCGTACGACTGATCGCCTGGCGCTGCCAATTGATACTTAATGCCAAGCTCAAAAACTCa                                                                >  5:358056/1‑149 (MQ=255)
                                                                                    cgcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCAt                                                               <  7:326929/149‑1 (MQ=255)
                                                                                    cgcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCAt                                                               <  7:200425/149‑1 (MQ=255)
                                                                                     gcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCAtt                                                              <  4:166510/149‑1 (MQ=255)
                                                                                     gcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCAtt                                                              <  8:44365/149‑1 (MQ=255)
                                                                                           tcctcGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAg                                                        >  2:93974/1‑149 (MQ=255)
                                                                                             ctcGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATTGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGt                                                      <  3:347856/149‑1 (MQ=255)
                                                                                             ctcGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAg                                                        <  6:356206/147‑1 (MQ=255)
                                                                                             ctcGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGt                                                      <  4:231883/149‑1 (MQ=255)
                                                                                                     ttGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCcaca                                              >  5:154325/1‑149 (MQ=255)
                                                                                                     ttGCTTTGAATCTCAGGCGCTAGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCcaca                                              >  8:213932/1‑149 (MQ=255)
                                                                                                      tGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCacac                                             >  1:302011/1‑149 (MQ=255)
                                                                                                       gcgttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCacac                                             <  4:270499/145‑1 (MQ=255)
                                                                                                         tttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGATTGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGt                                          >  2:322068/1‑149 (MQ=255)
                                                                                                         tttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCa                                                         <  6:229643/134‑1 (MQ=255)
                                                                                                         tttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCa                                                         >  5:229643/1‑134 (MQ=255)
                                                                                                         tttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGt                                          >  2:119035/1‑149 (MQ=255)
                                                                                                               tctcAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAAAGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCt                                    >  1:273580/1‑149 (MQ=255)
                                                                                                                 tcAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCa                                  <  7:77289/149‑1 (MQ=255)
                                                                                                                 tcAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAg                                 >  8:94829/1‑149 (MQ=255)
                                                                                                                  cAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAg                                 >  8:48579/1‑149 (MQ=255)
                                                                                                                   aGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAg                                 <  2:337724/148‑1 (MQ=255)
                                                                                                                   aGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGAACGCCTGGCGCTGCCAATAGATCCTTAATGACAAGCTCAAAAACTAATTGAGCAGGTGCCCCACACGGTGATGCTCa                                  >  4:221086/1‑147 (MQ=255)
                                                                                                                                     aCCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaa              <  6:154325/149‑1 (MQ=255)
                                                                                                                                      ccccAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaag             <  3:128039/149‑1 (MQ=255)
                                                                                                                                       cccAACCCGCGCCATACCACCCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatct                            >  8:323374‑M2/1‑55 (MQ=255)
                                                                                                                                       cccAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatct                            <  7:323374‑M2/134‑80 (MQ=255)
                                                                                                                                       cccAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaag             <  1:93974/149‑1 (MQ=255)
                                                                                                                                       cccAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaaga            <  1:311351/149‑1 (MQ=255)
                                                                                                                                         cAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatctgacaccgcgtccggctg           <  2:330333‑M2/149‑97 (MQ=255)
                                                                                                                                         cAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaagaag          >  3:123139/1‑149 (MQ=255)
                                                                                                                                              aGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCtt     >  7:82662/1‑149 (MQ=255)
                                                                                                                                                 gcCAggcgatcaggcgtacgccggtacccattcctccggttggtatggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatctgacaccgc                    >  3:333686‑M1/1‑4 (MQ=255)
                                                                                                                                                 gcCAggcgatcaggcgtacgccggtacccattcctccggttggtatggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatctgacaccgc                    <  4:333686‑M1/132‑129 (MQ=255)
                                                                                                                                                 gcCAggcgatcaggcgtacgccggtacccattcctccggttggtatggcgctgtttggggtgccagctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatctgacaccgcgtccggctgacctagag   >  2:271685‑M1/1‑4 (MQ=255)
                                                                                                                                                 gcCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGAc  <  7:48579/149‑1 (MQ=255)
                                                                                                                                                  ccAggcgatcaggcgtacgccggtacccattcctccggttggtatggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatctgacaccgcgtccggctgacctagag   >  6:317793‑M1/1‑3 (MQ=255)
                                                                                                                                                   cAggcgatcaggcgtacgccggtacccattcctccggttggtatggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatctgacaccgcgtccggctgacctagag   >  6:47667‑M1/1‑2 (MQ=255)
                                                                                                                                                   cAggcgatcaggcgtacgccggtacccattcctccggttggtatggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatctgac                         >  2:348095‑M1/1‑2 (MQ=255)
                                                                                                                                                   cAggcgatcaggcgtacgccggtacccattcctccggttggtatggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatctgac                         <  1:348095‑M1/125‑124 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GCGGTCGAGTCCGTCAAATGATTGCCAGAACTCGTCCTCAATCTGCTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGAC  >  NC_002947/4218067‑4218360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.