New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 421821562 (1.100)3 (0.060) 3/242 NT 5.1% coding (1082/1500 nt) PP_3698 hypothetical protein
?NC_002947 = 4218256 53 (1.000)coding (1041/1500 nt) PP_3698 hypothetical protein

CTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTGGCCCGCGCACGTAATACGGCGGC  >  NC_002947/4218112‑4218399
                                                                                                                                                |                                                                                                                                                
ctctAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCTGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggc                                                                                                                                              >  2:271685‑M2/1‑145 (MQ=255)
ctctAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGcc                                                                                                                                                  <  1:336839/145‑1 (MQ=255)
ctctAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtgg                                                                                                                                               >  6:317793‑M2/1‑145 (MQ=255)
ctctAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtg                                                                                                                                                >  6:47667‑M2/1‑145 (MQ=255)
      gTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGcc                                                                                                                                        <  3:170711/149‑1 (MQ=255)
         aGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAAt                                                                                                                                     <  2:8835/149‑1 (MQ=255)
             ggACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGAt                                                                                                                                 >  1:337724/1‑149 (MQ=255)
                 gcgGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggc                                                                                                                                              <  4:333686‑M2/132‑5 (MQ=255)
                 gcgGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggc                                                                                                                                              >  3:333686‑M2/1‑128 (MQ=255)
                    gtgtCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAAt                                                                                                                          <  7:232615/149‑1 (MQ=255)
                      gtCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtg                                                                                                                                                <  1:348095‑M2/125‑3 (MQ=255)
                      gtCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtg                                                                                                                                                >  2:348095‑M2/1‑123 (MQ=255)
                       tCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGc                                                                                                                        >  3:270499/1‑148 (MQ=255)
                         aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTATCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAAt                                                                                                                          <  6:285937/144‑1 (MQ=255)
                         aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTATCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAAt                                                                                                                          >  5:285937/1‑144 (MQ=255)
                         aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAAt                                                                                                                                     <  8:38719/133‑1 (MQ=255)
                         aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAAt                                                                                                                                     >  7:38719/1‑133 (MQ=255)
                         aGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCaa                                                                                                                     >  1:264504/1‑149 (MQ=255)
                               agagTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCaa                                                                                                               <  2:264504/149‑1 (MQ=255)
                               agagTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCa                                                                                                                >  2:311351/1‑148 (MQ=255)
                               agagTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCa                                                                                                                >  8:77289/1‑148 (MQ=255)
                                 agTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCaaa                                                                                                              >  4:128039/1‑148 (MQ=255)
                                      gcgcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCa                                                                                                       <  8:1154/149‑1 (MQ=255)
                                      gcgcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACAGGCGTACGACTGATCGCCTGGCGCTGCCAATTGATACTTAATGCCAAGCTCAAAAACTCa                                                                                                       >  5:358056/1‑149 (MQ=255)
                                       cgcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCAt                                                                                                      <  7:326929/149‑1 (MQ=255)
                                       cgcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCAt                                                                                                      <  7:200425/149‑1 (MQ=255)
                                        gcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCAtt                                                                                                     <  8:44365/149‑1 (MQ=255)
                                        gcATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCAtt                                                                                                     <  4:166510/149‑1 (MQ=255)
                                              tcctcGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAg                                                                                               >  2:93974/1‑149 (MQ=255)
                                                ctcGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATTGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGt                                                                                             <  3:347856/149‑1 (MQ=255)
                                                ctcGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAg                                                                                               <  6:356206/147‑1 (MQ=255)
                                                ctcGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGt                                                                                             <  4:231883/149‑1 (MQ=255)
                                                        ttGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCcaca                                                                                     >  5:154325/1‑149 (MQ=255)
                                                        ttGCTTTGAATCTCAGGCGCTAGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCcaca                                                                                     >  8:213932/1‑149 (MQ=255)
                                                         tGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCacac                                                                                    >  1:302011/1‑149 (MQ=255)
                                                          gcgttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCacac                                                                                    <  4:270499/145‑1 (MQ=255)
                                                            tttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGATTGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGt                                                                                 >  2:322068/1‑149 (MQ=255)
                                                            tttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCa                                                                                                >  5:229643/1‑134 (MQ=255)
                                                            tttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCa                                                                                                <  6:229643/134‑1 (MQ=255)
                                                            tttGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGt                                                                                 >  2:119035/1‑149 (MQ=255)
                                                                  tctcAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAAAGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCt                                                                           >  1:273580/1‑149 (MQ=255)
                                                                    tcAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCa                                                                         <  7:77289/149‑1 (MQ=255)
                                                                    tcAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAg                                                                        >  8:94829/1‑149 (MQ=255)
                                                                     cAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAg                                                                        >  8:48579/1‑149 (MQ=255)
                                                                      aGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAg                                                                        <  2:337724/148‑1 (MQ=255)
                                                                      aGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGAACGCCTGGCGCTGCCAATAGATCCTTAATGACAAGCTCAAAAACTAATTGAGCAGGTGCCCCACACGGTGATGCTCa                                                                         >  4:221086/1‑147 (MQ=255)
                                                                                        aCCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaa                                                     <  6:154325/149‑1 (MQ=255)
                                                                                         ccccAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaag                                                    <  3:128039/149‑1 (MQ=255)
                                                                                          cccAACCCGCGCCATACCACCCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatct                                                                   >  8:323374‑M2/1‑55 (MQ=255)
                                                                                          cccAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatct                                                                   <  7:323374‑M2/134‑80 (MQ=255)
                                                                                          cccAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaag                                                    <  1:93974/149‑1 (MQ=255)
                                                                                          cccAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaaga                                                   <  1:311351/149‑1 (MQ=255)
                                                                                            cAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCtggcgctgtttggggtgcccgctgtcgagcgcctgagattcaaagcaattgccgaggagcatgcgccaactctggatctgacaccgcgtccggctg                                                  <  2:330333‑M2/149‑97 (MQ=255)
                                                                                            cAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCaagaag                                                 >  3:123139/1‑149 (MQ=255)
                                                                                                 aGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCtt                                            >  7:82662/1‑149 (MQ=255)
                                                                                                    gcCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGAc                                         <  7:48579/149‑1 (MQ=255)
                                                                                                        tACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGc                                                                                                 >  5:287415/1‑89 (MQ=255)
                                                                                                        tACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGc                                                                                                 <  6:287415/89‑1 (MQ=255)
                                                                                                          ccAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCcgc                                  <  7:94829/149‑1 (MQ=255)
                                                                                                                     aaTGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTgg                        >  2:114902/1‑149 (MQ=255)
                                                                                                                      aTGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTGGc                       <  8:82662/149‑1 (MQ=255)
                                                                                                                           tACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTGGCCcgcg                  >  2:187009/1‑149 (MQ=255)
                                                                                                                              cGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTGGCCCGCGCAc               <  4:123139/149‑1 (MQ=255)
                                                                                                                              cGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGATGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCcgct                                 >  4:69586/1‑131 (MQ=255)
                                                                                                                              cGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGATGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCcgct                                 <  3:69586/131‑1 (MQ=255)
                                                                                                                                         tGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTGGCCCGCGCACGTAATAcggcg    >  8:198721/1‑149 (MQ=255)
                                                                                                                                         tGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTGGCCCGCGCACGTAATAcggcg    >  8:234261/1‑149 (MQ=255)
                                                                                                                                          gATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTGGCCCGCGCACGTAATAcggcgg   >  1:56931/1‑149 (MQ=255)
                                                                                                                                            tCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCGACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTGGCCCGCGCACGTAATACggcggc  <  7:213932/148‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                
CTCTAGGTCAGCCGGACGCGGTGTCAGATCCAGAGTTGGCGCATGCTCCTCGGCAATTGCTTTGAATCTCAGGCGCTCGACAGCGGGCACCCCAAACAGCGCCATACCAACCGGAGGAATGGGTACCGGCGTACGCCTGATCGCCTGGCGCTGCCAATTGATCCTTAATGCCAAGCTCAAAAACTCATTGAGCAGGTGACCCACACGGTGATGCTCAGCGACTAGGCCAGTTTTCAAGAAGCTCTTGACGTCCCGCTCGCTTCTGGCCCGCGCACGTAATACGGCGGC  >  NC_002947/4218112‑4218399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.