New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1747697	49 (0.870)	4 (0.070)	4/246	NT	7.4%	intergenic (‑189/+342)	PP_5473/PP_5474	LuxR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 1747758	54 (1.000)					intergenic (‑250/+281)	PP_5473/PP_5474	LuxR family transcriptional regulator/hypothetical protein

GCGAGGCGCCAGGCCTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCATTTTTTCGGCTCAGCTTTACCTGGTAACCGCTGGT  >  NC_002947/1747614‑1747905                                                                                                                                                  |                                                                                                                                                    gcgAGGCGCCAGGCCTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGatg                                                                                                                                                  <  5:305264‑M2/148‑4 (MQ=255)         ccAGGCCTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGtt                                                                                                                                         >  7:129264/1‑149 (MQ=255)             gCCTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTc                                                                                                                                             <  4:310531/141‑1 (MQ=255)             gCCTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTc                                                                                                                                             >  3:310531/1‑141 (MQ=255)             gCCTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAg                                                                                                                                     <  5:95580/149‑1 (MQ=255)              ccTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAgg                                                                                                                                    <  8:290891/149‑1 (MQ=255)               cTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAggg                                                                                                                                   >  8:38435/1‑148 (MQ=255)               cTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGt                                                                                                                                   >  1:342348/1‑149 (MQ=255)               cTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGGGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGt                                                                                                                                   <  3:132389/149‑1 (MQ=255)                     cGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTgatgg                                                                                                                             >  7:146204/1‑149 (MQ=255)                     cGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTgatgg                                                                                                                             <  2:271495/149‑1 (MQ=255)                         gTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTgatggggat                                                                                                                         <  4:225991/149‑1 (MQ=255)                         gTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTgatggggat                                                                                                                         <  8:129264/149‑1 (MQ=255)                               tATCCATGCGCCGATAGTGATCGTGTCCATTTTTGAGTCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTc                                                                                                                    >  1:59069/1‑149 (MQ=255)                                   cATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTAt                                                                                                                <  4:190287/148‑1 (MQ=255)                                    aTGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATgg                                                                                                              >  5:277726/1‑149 (MQ=255)                                        gcCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCCCGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTg                                                                                                          >  4:62519/1‑149 (MQ=255)                                          cGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGt                                                                                                         >  1:76736/1‑148 (MQ=255)                                           gATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTaa                                                                                                       <  8:146204/149‑1 (MQ=255)                                                tGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGgcgc                                                                                                  <  6:305264/149‑1 (MQ=255)                                                 gATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCa                                                                                                 >  4:242256/1‑149 (MQ=255)                                                 gATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCa                                                                                                 <  8:201706/149‑1 (MQ=255)                                                      tgtCCATTTTTGA‑TCTCGGGGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGc                                                                                            <  4:49032/149‑1 (MQ=255)                                                                    tctcGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAg                                                                                <  3:62519/148‑1 (MQ=255)                                                                      tcGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATgg                                                                                                              >  3:252500/1‑116 (MQ=255)                                                                      tcGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATgg                                                                                                              <  4:252500/116‑1 (MQ=255)                                                                      tcGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTc                                                                             >  3:247360/1‑149 (MQ=255)                                                                             gggCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATgg                                                                      <  2:342348/149‑1 (MQ=255)                                                                               gCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGgt                                                                    <  5:151357/149‑1 (MQ=255)                                                                                    aTTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGatgcagcccacaccgagatcaaaaatggacacgatcactatcggcgcatggataggccacctcggccgaggcctggcgcctcgcg                                                                <  8:38049‑M2/148‑86 (MQ=255)                                                                                       ggTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGAt                                                             <  3:242256/148‑1 (MQ=255)                                                                                        gTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGatgcagcccacaccgagatcaaaaatggacacgatcactatcggcgcatggataggccacctcggccgaggcctggcgcctcgcgaatt                                                            >  7:38049‑M2/1‑59 (MQ=255)                                                                                        gTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCt                                                           >  7:210028/1‑149 (MQ=255)                                                                                           gTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAg                                                                                >  8:275152/1‑125 (MQ=255)                                                                                           gTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAg                                                                                <  7:275152/125‑1 (MQ=255)                                                                                           gTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGgtgt                                                                  >  4:311383/1‑139 (MQ=255)                                                                                           gTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGgtgt                                                                  <  3:311383/139‑1 (MQ=255)                                                                                            tGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGatgcagcccacaccgagatcaaaaatggacacgatcactatcggcgcatggataggccacctcggccgaggcctggcgcctcgcgaattgcaat                                                       <  3:299877‑M2/149‑95 (MQ=255)                                                                                            tGACGCTCGCTACCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGAcc                                                       >  3:126944/1‑149 (MQ=255)                                                                                                         cGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCgg                                          <  6:277726/149‑1 (MQ=255)                                                                                                           tCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCgggg                                        >  6:106950/1‑149 (MQ=255)                                                                                                               ccTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGatgcagcccacaccgagatcaaaaatggacacgatcactatcggcgcatggataggccacctcggccgaggcctggcgcctcgcgaattgcaatgccttctcgaggttgctcg                                    >  4:299877‑M2/1‑36 (MQ=255)                                                                                                               ccTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCAt                                    <  4:126944/149‑1 (MQ=255)                                                                                                                cTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCAtt                                   >  3:124249/1‑149 (MQ=255)                                                                                                                 tCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCTGGGGTCAttt                                  >  7:304039/1‑149 (MQ=255)                                                                                                                 tCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCTGGGGTCAttt                                  >  7:299099/1‑149 (MQ=255)                                                                                                                 tCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCAttt                                  >  1:319347/1‑149 (MQ=255)                                                                                                                 tCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCAttt                                  >  5:358182/1‑149 (MQ=255)                                                                                                                 tCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCAttt                                  >  2:74214/1‑149 (MQ=255)                                                                                                                  ccccGACCAACGGGAGGGCGAACGCCACGACCGATGCAGTCGGGTTAAGGTTGATGGGGCTGGGCCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCAtttt                                 <  4:247360/149‑1 (MQ=255)                                                                                                                   ccGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCAgtttt                                >  6:288149/1‑149 (MQ=255)                                                                                                                         cAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCATTTTTTCGGCt                          <  5:106950/149‑1 (MQ=255)                                                                                                                          aaGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCATTTTTTCGGCTc                         <  2:319347/149‑1 (MQ=255)                                                                                                                                  ggagAACGTCACGACCGATGCCTTCGTTTTACGGTTGATGGGGTAGGGTCTTAGGGTCTGTACGCCGCACGGGCTAGCACCTTAAGGGCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCTGGGGTCATTTTTTCGGCTCAGCTTTAc                 <  8:304039/146‑1 (MQ=255)                                                                                                                                  ggCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGAGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCATTTTTTCGGCTCAGCTTTa                  <  7:334280/148‑1 (MQ=255)                                                                                                                                  ggCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGAGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCATTTTTTCGGCTCAGCTTTa                  >  8:334280/1‑148 (MQ=255)                                                                                                                                  ggCGAACGTCACGACCCCTGCAGTCGGTTTAAGGGTGAGGGGGCTGGGTCTTATGGGCGGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCTGGGGTCATTTTTTCGGCTCAGCTTTAc                 <  8:299099/149‑1 (MQ=255)                                                                                                                                   gCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCATTTTTTCGGCTCAGCTTTAcc                <  1:74214/149‑1 (MQ=255)                                                                                                                                    cGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCg                                           >  6:229039/1‑121 (MQ=255)                                                                                                                                      aaCGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCATTTTTTCGGCTCAGCTTTACCTgg             <  2:59069/149‑1 (MQ=255)                                                                                                                                             cGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAACGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCATTTTTTCGGCTCAGCTTTACCTGGTAACCGc      >  5:41393/1‑149 (MQ=255)                                                                                                                                                ccGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCA‑TTTTTCGGCTCAGCTTTACCTGGTAACCGCTGGt  <  4:124249/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    GCGAGGCGCCAGGCCTCGGCCGAGGTGGCCTATCCATGCGCCGATAGTGATCGTGTCCATTTTTGA‑TCTCGGTGTGGGCTGCATTGGTCGTGACGCTCGCTGCCGTCTACCTCCCGGACCAAGGGGAGGGCGAACGTCACGACCGATGCAGTCGGTTTAAGGTTGATGGGGATGGGTCTTATGGGCTGTAAGGCGCACGGGCTTGCACCTTAAGGTCTGCATGGGTGTGTGATCTGACCGGCTCGGCGCCGGGGTCATTTTTTCGGCTCAGCTTTACCTGGTAACCGCTGGT  >  NC_002947/1747614‑1747905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.