| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 61251 = | 36 (0.650) | 5 (0.090) | 4/248 | NT | 13.0% | coding (421/885 nt) | PP_0052 | beta‑lactamase domain‑containing protein |
| ? | NC_002947 | 61276 = | 32 (0.600) | coding (446/885 nt) | PP_0052 | beta‑lactamase domain‑containing protein | |||||
CGCGATCTCGCCGGCATCTTCGATCATGAAACTCATGCACGCGGGTGTGTGCCCAGGCGTGTGCA‑ACGCACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/61325‑61251‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcACACACCCGCGTGCATGAGTTTCATGATCGAAGATGCCGGCGAGATCGCGGTGTTCGTTGGAGACACCTTGTTCATGCCCGACTATGGCACCGCCCGCTGCGACTTCCCCGGGGCCGATGCCCGCACCTTGTACCGCTCAATCCGTC > NC_002947/61276‑61422 CGCGATCTCGCCGGCATCTTCGATCATGAAACTCATGCACGCGGGTGTGTGCCCGTGCGT‑TGCACACGCCTGGGCACACACCCGC < 5:185936/85‑1CGCGATCTCGCCGGCATCTTCGATCATGAAACTCATGCACGCGGGTGTGTGCCCGTGCGT‑TGCACACGCCTGGGCACACACCCGC > 6:185936/1‑85 GCGATCTCGCCGGCATCTTCGATCATGAAACTCATGCACGCGGGTGTGTGCCCGTGCGT‑TGCACACGCCTGGGCACACACCCGC < 7:210194/84‑1 GCGATCTCGCCGGCATCTTCGATCATGAAACTCATGCACGCGGGTGTGTGCCCGTGCGT‑TGCACACGCCTGGGCACACACCCGC > 8:210194/1‑84 GTGCCCAGGCGTGTGCA‑ACGCACGGGCACACACCCGCGTGCATGAGTTTCATGATCGAAGATGCCGGCGAGATCGCGGTGTTCGTTGGAGACACCTTGTTCATGCCCGACTATGGCACCGCCCGCTGCGACTTCCCCGGGGCCGATGCC > 7:137451/1‑149 GCACACTCCCGCGTGCATGAGTTTCATGATGGAAGATGCCGGCGAGATCGCGGTGTTCGTTGGAGACACCTTGTTCATGCCCGACTATGGCACCGCCCGCTGCGACTTCCCCGGGGCCGATGCCCGCACCTTGTACCGCTCAATCCGT < 7:114603/148‑1 GCACACACCCGCGTGCATGAGTTTCATGATCGAAGATGCCGGCGAGATCGCGGTGTTCGTTGGAGACACCTTGTTCATGCCCGACTATGGCACCGCCCGCTGCGACTTCCCCGGGGCCGATGCCCGCACCTTGTACCGCTCAATCCGTC < 3:32935/149‑1 GCACACACCCGCCTGCATGAGTTTCATGATCGAAGATGCCGGCGAGATCGCGGTGTTCGTTGGAGACACCTTGTTCATGCCCGACTATGGCACCGCCCGCTGCGACTTCCCCGGGGCCGATGCCCGCACCTTGTACCGCTCAATCCGTC < 8:311041/149‑1 CGCGATCTCGCCGGCATCTTCGATCATGAAACTCATGCACGCGGGTGTGTGCCCAGGCGTGTGCA‑ACGCACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/61325‑61251‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcACACACCCGCGTGCATGAGTTTCATGATCGAAGATGCCGGCGAGATCGCGGTGTTCGTTGGAGACACCTTGTTCATGCCCGACTATGGCACCGCCCGCTGCGACTTCCCCGGGGCCGATGCCCGCACCTTGTACCGCTCAATCCGTC > NC_002947/61276‑61422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |