New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 170160 = | 48 (0.870) | 3 (0.060) | 3/248 | NT | 6.3% | coding (562/1221 nt) | PP_0159 | family III CoA‑transferase |
? | NC_002947 | 170220 = | 42 (0.780) | coding (622/1221 nt) | PP_0159 | family III CoA‑transferase |
GCATTACCCAGCCGACGGGGAGGGGTGCCCGTGGTCAGGTAGTTCATCGCCTGGTTCGCCAGACAGGCCACCTGCACATCAAGCAATGCCATGTCGACATGCTGGCCGACCCCTGTCTGATCCCGATGGGCGAGGGCAGCCAGCATGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/170311‑170160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacATGGCATTGCTTGATGTGCAGGTGGCCTGTCTGGCGAACCAGGCGATGAACTACCTGACCACGGGCACCCCTCCCCGTCGGCTGGGTAATGCGCATCCTAATATAGTCCCTTACCAGGACTTTCCGACGGCAGATGGCGATTTCA > NC_002947/170220‑170364 GCATTACCCAGCCGACGGGGAGGGGTGCCCGTGGTCAGGTAGTTCATCGCCTGGTTCGCCAGACAGGCCACCTGCACATCAAGCAATGCCATGTCGACATGCTGGCCGACCCCTGTCTGATCCCGATGGGCGAGGGCAGCCAGCATGGC > 8:286609/1‑149 CATTACCCAGCCGACGGGGAGGGGTGCCCGTGGTCAGGTAGTTCATCGCCTGGTTCGCCAGACAGGCCACCTGCACATCAAGCAATGCCATGTCGACATGCTGGCCGACCCCTGTCTGATCCCGATGGGCGAGGGCAGCCAGCATGGCG < 7:326233/149‑1 ATTACCCAGCCGACGGGGAGGGGTGCCCGTGGTCAGGTAGTTCATCGCCTGGTTCGCCAGACAGGCCACCTGCACATCAAGCAATGCCATGTCGACATGCTGGCCGACCCCTGTCTGATCCCGATGGGCGAGGGCAGCCAGCATGGCGA > 2:94192/1‑149 GACATGCTGGCCGACCCCTGTCTGATCCCGATGGGCGAGGGCAGCCAGCATGGCGACATGGCATTGCTTGATGTGCAGGTGGCCTGTCTGGCGAACCAGGCGATGAACTACCTGACCACGGGCACCCCTCCCCGTCGGCTGGGTAATGC > 7:70949/1‑149 GCCGACCCCTGTCTGATCCCGATGGGCGAGGGCAGCCAGCATGGCGACATGGCATTGCTTGATGTGCAGGTGGCCTGTCTGGCGAACCAGGCGATGAACTACCTGACCACGGGCACCCCTCCCCGTCGGCTGGGTAATGCGCATCCTAA > 3:326776/1‑149 GCCGACCCCTGTCTGATCCCGATGGGCGAGGGCAGCCAGCATGGCGACATGGCATTGCTTGATGTGCAGGTGGCCTGTCTGGCGAACCAGGCGATGAACTACCTGACCACGGGCACCCCTCCCCGTCGGCTGGGTAATGCGCATCCTAA < 4:326776/149‑1 GACATGGCATTGCTTGATGTGCAGGTGGCCTGTCTGGCGAACCAGGCGATGAACTACCTGACCACTGGCACCGCTCCCCGTCGGCTGGGTAATGGGCATCCTAATATAGTCCCTTACCAGGACTTTCCGACGGCAGATGGCGATTTCA < 1:282823/148‑1 GACATGGCATTGCTTGATGTGCAGGTGGCCTGTCTGGCGAACCAGGCGATGAACTACCTGACCACGGGCACCCCTCCCCGTCGGCTGGGTAATGCGCATCCTAATATAGTCCCTTACCAGGACTTTCCGACGGCAGATGGCGATTTCA < 8:326233/148‑1 GCATTACCCAGCCGACGGGGAGGGGTGCCCGTGGTCAGGTAGTTCATCGCCTGGTTCGCCAGACAGGCCACCTGCACATCAAGCAATGCCATGTCGACATGCTGGCCGACCCCTGTCTGATCCCGATGGGCGAGGGCAGCCAGCATGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/170311‑170160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacATGGCATTGCTTGATGTGCAGGTGGCCTGTCTGGCGAACCAGGCGATGAACTACCTGACCACGGGCACCCCTCCCCGTCGGCTGGGTAATGCGCATCCTAATATAGTCCCTTACCAGGACTTTCCGACGGCAGATGGCGATTTCA > NC_002947/170220‑170364 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |