New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 209901 | NA (NA) | 7 (0.130) | 7/242 | NT | 88.1% | coding (15407/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | = 209956 | 1 (0.020) | coding (15462/26049 nt) | PP_0168 | putative surface adhesion protein |
GCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCggtgacc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/209754‑209901 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCACCGACGTGCTGACCGGCGTCTTGTCCAGCGTAAGCTGTTCGAACTTGCCGACATCCGCGCCCTCAACGGTTGCGATCGACATCACGACAGGGTCGTTAGCGC < NC_002947/209956‑209802 GCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTGAGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCG < 7:257802/149‑1 GTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGAC < 5:36888/149‑1 TCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCTTGACCAAGTCGCCTTCGTTGC > 5:174194/1‑149 ACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCAC < 6:174194/148‑1 ACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGCCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCACC < 1:296138/149‑1 GATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCACCGACGT < 3:140898/135‑1 GATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCACCGACGT > 4:140898/1‑135 AACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGG < 1:340640/119‑1 AACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGG > 2:340640/1‑119 GGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCACCGACGTGCTGACCGGCGTCTTGTCCAGCGTAAGCTGTTCGAACTTGCCGACATCCGCGCCCTCAACGGTTGCGATCGACATCACGACAGGGTCGT > 2:138/1‑149 GGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCACCGACGTGCTGACCGGCGTCTTGTCCAGCGTAAGCTGTTCGAACTTGCCGACATCCGCGCCCTCAACGGTTGCGATCGACATCACGACAGGGTCGT > 3:135981/1‑149 cggcCCTTGACCCTGTCGCCTTCGTTGCCCGGGGTAGCTGGCGCGTCGGTCACCGACGTGCTGACCGGCGTCTTGTCCAGCGTAAGCTGTTCGAACTTGCCGACATCCGCGCCCTCAACGGTTGCGATCGACATCACGACAGGGTCGT < 6:222089/144‑1 GTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCACCGACGTGCTGACCGGCGTCTTGTCCAGCGTAAGCTGTTCGAACTTGCCGACATCCGCGCCCTCAACGGTTGCGATCGACATCACGACAGGGTCGT < 6:263414/148‑1 CCTTGACCAAGTCGCCTTAGTTGCCCGGCGTACCTGGCTCGTCGGTCACCGACGTGCTGACCGGCGTCTTGTCCAGCGTAAGCTGTTCTAACTTGCCGACATCCGCGCCCTCAACGGTTGCGATCGACATCACGACAGGGTCGTTAGCG < 7:243866/149‑1 CTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCACCGACGTGCTGACCGGCGTCTTGTCCAGCGTAAGCTGTTCGAACTTGCCGACATCCGCGCCCTCAACGGTTGCGATCGACATCACGACAGGGTCGTTAGCGC > 6:367956/1‑149 GCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCggtgacc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/209754‑209901 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCTTGACCAAGTCGCCTTCGTTGCCCGGCGTACCTGGCTCGTCGGTCACCGACGTGCTGACCGGCGTCTTGTCCAGCGTAAGCTGTTCGAACTTGCCGACATCCGCGCCCTCAACGGTTGCGATCGACATCACGACAGGGTCGTTAGCGC < NC_002947/209956‑209802 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |