New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 209901 | NA (NA) | 7 (0.130) | 7/242 | NT | 88.1% | coding (15407/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | = 209956 | 1 (0.020) | coding (15462/26049 nt) | PP_0168 | putative surface adhesion protein |
GCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCC > NC_002947/209802‑210031 | gcgcTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAG > 6:367956‑M2/1‑149 (MQ=255) cgcTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTAGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACTAAGGCGACTTGGTCAAGG < 7:243866‑M2/149‑1 (MQ=255) aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGCGCCAGCTACCCCGGGCAACGAAGGCGACAGGGTCAAGGgccg < 6:222089‑M2/148‑5 (MQ=255) aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACC > 2:138‑M2/1‑149 (MQ=255) aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACC > 3:135981‑M2/1‑149 (MQ=255) aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCAC < 6:263414‑M2/148‑1 (MQ=255) aCGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCgacgtgctgaccggcgtcttgtccagcgtaagctgttcgaacttgccgacatccgcgccctcaacggttgcgatc < 3:140898‑M2/135‑76 (MQ=255) aCGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCgacgtgctgaccggcgtcttgtccagcgtaagctgttcgaacttgccgacatccgcgccctcaacggttgcgatc > 4:140898‑M2/1‑60 (MQ=255) | GCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCC > NC_002947/209802‑210031 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |