New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	604239 =	46 (0.830)	3 (0.060)	3/248	NT	6.3%	coding (71/501 nt)	nusB	transcription antitermination protein
	?	NC_002947	604287 =	45 (0.840)					coding (119/501 nt)	nusB	transcription antitermination protein

GGTAGAGGGCCTGGGTCGCGAGCTTGCGGGCTTCGCGGCGCTTGGCGCTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/604289‑604239 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctctACCAGTGGCACATGGCCCAGCATTCGCTGAACGAGATCGAAGCGCAATTCCGGGTGGATAACGATTTCACCGATGTCGACGGTGCCTATTTCCGCGAGATCC  >  NC_002947/604287‑604388                                                                                                                                                           GGTAGAGGGCCTGGGTCGCGAGCTTGCGGGCTTCGCGGCGCTTGGCGCTCTACCAGTGGCACATGGCCCAGCATTCGCTGAACGAGATCGAAGCGCAATTCCGGGTGGATAACGATTTCACCGATGTCGACGGTGCCTATTTCCGC         >  1:86184/1‑146     GAGGGCCTGGGTCGCGAGCTTGCGGGCTTCGCGGCGCTTGGCGCTCTACCAGTGGCACATGGCCCAGCATTCGCTGAACGAGATCGAAGCGCAATTCCGGGTGGATAACGATTTCACCGATGTCGACGGTGCCTATTTCCGCGAGATCC  >  3:302732/1‑149     GAGGGCCTGGGTCGCGAGCTTGCGGGCTTCGCGGCGCTTGGCGCTCTACCAGTGGCACATGGCCCAGCATTCGCTGAACGAGATCGAAGCGCAATTCCGGGTGGATAACGATTTCACCGATGTCGACGGTGCCTATTTCCGCGAGATC   <  2:86184/148‑1                                                                                                                                                           GGTAGAGGGCCTGGGTCGCGAGCTTGCGGGCTTCGCGGCGCTTGGCGCTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/604289‑604239 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctctACCAGTGGCACATGGCCCAGCATTCGCTGAACGAGATCGAAGCGCAATTCCGGGTGGATAACGATTTCACCGATGTCGACGGTGCCTATTTCCGCGAGATCC  >  NC_002947/604287‑604388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.