| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 890884 = | 51 (0.920) | 4 (0.080) | 4/242 | NT | 8.3% | coding (48/711 nt) | yiaD | OmpA/MotB domain‑containing protein |
| ? | NC_002947 | 890927 = | 40 (0.760) | coding (91/711 nt) | yiaD | OmpA/MotB domain‑containing protein | |||||
ATCAGGGCCCCCTTGCCACGGTTGTTGTGGTCGATGGCGGCACCCGCGATGGCACCGGCCAGCGCGCCCAAACCGCCGTACTTGGCAGTCTTGCTCATCCCTGTGGAGCCCTGCGCCTGACCCTGGTTGTCGTAAGGGTTCTGGCCGGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/891036‑890884‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcagGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGCCCTGATCGGTGCCGCAGCAGTGGGTGCTGCCGCTGCAGG > NC_002947/890927‑891069 ATCAGGGCCCCCTAGCCACGGTTGTTGTGGTCGATGGCGGCACCCGCGATGGCACCGGCCAGCGCGCCCAAACCGCCGTACTTGGCAGTCTTGCTCATCCCTGTGGAGCCCTGCGCCTGACCCTGGTTGTCGTAAGGGTTCTGGCCGGC > 7:137780/1‑149ATCAGGGCCCCCTAGCCACGGTTGTTGTGGTCGATGGCGGCACCCGCGATGGCACCGGCCAGCGCGCCCAAACCGCCGTACTTGGCAGTCTTGCTCATCCCTGTGGAGCCCTGCGCCTGACCCTGGTTGTCGTAAGGGTTCTGGCCGGC > 7:142455/1‑149 GGGCCCCCTTGCCACGGTTGTTGTGGTCGATGGCGGCACCCGCGATGGCACCGGCCAGCGCGCCCAAACCGCCGTACTTGGCAGTCTTGCTCATCCCTGTGGAGCCCTGCGCCTGACCCTGGTTGTCGTAAGGGTTCTGGCCGGCGCAG > 4:214438/1‑149 ACGGTTGTTGTGGTCGATGGCGGCACCCGCGATGGCACCGGCCAGCGCGCCCAAACCGCCGTACTTGGCAGTCTTGCTCATCCCTGTGGAGCCCTGCGCCTGACCCTGGTTGTCGTAAGGGTTCTGGCCGG > 1:8479/1‑131 ACGGTTGTTGTGGTCGATGGCGGCACCCGCGATGGCACCGGCCAGCGCGCCCAAACCGCCGTACTTGGCAGTCTTGCTCATCCCTGTGGAGCCCTGCGCCTGACCCTGGTTGTCGTAAGGGTTCTGGCCGG < 2:8479/131‑1 GCCCTGCGCCTGACGCTGGTTGTCGTAAGGGTTCTGGCCGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGG > 7:305047/1‑149 CCTGCGCCTGACCCTGGTTGTCGTAAGGGTTCTGGCCGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGCC > 2:29806/1‑149 CCTGACCCTGGTTGTCGTAAGGGTTCTGGCCGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGCCCTGATC < 1:29806/149‑1 ACCCTGGTTGTCGTAAGGGTTCTGGCCGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGCCCTGATCGG < 8:305047/147‑1 GCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGAGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGCCCTGATCTGTGCCGCAGCAGTGGGTGCTGCCGCTGCAGG > 6:320045/1‑149 ATCAGGGCCCCCTTGCCACGGTTGTTGTGGTCGATGGCGGCACCCGCGATGGCACCGGCCAGCGCGCCCAAACCGCCGTACTTGGCAGTCTTGCTCATCCCTGTGGAGCCCTGCGCCTGACCCTGGTTGTCGTAAGGGTTCTGGCCGGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/891036‑890884‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcagGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGCCCTGATCGGTGCCGCAGCAGTGGGTGCTGCCGCTGCAGG > NC_002947/890927‑891069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |