New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 890884 = | 51 (0.920) | 4 (0.080) | 4/242 | NT | 8.3% | coding (48/711 nt) | yiaD | OmpA/MotB domain‑containing protein |
? | NC_002947 | 890927 = | 40 (0.760) | coding (91/711 nt) | yiaD | OmpA/MotB domain‑containing protein |
GGAATTTTTCGTTGCCGATGCGTTCCAAGGCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGCCC > NC_002947/890741‑891032 | cctgcagcggcagcacccactgctgcggcacagatcagggcccccttgccacggttgttgtggtcgatggcggcaccctcgatggcaccggccagcgcgcccaaaccgccgtacttggcagtcttgctcatccctgtggagccCTgcgc > 6:320045‑M1/144‑149 (MQ=255) ttGCCGATGCGTTCCAAGGCTGGCATAGAACCCCTTTGGATCTGCCTCATTTATGAATTTCAGTAGGAGCTTCTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAAcc < 8:88365/149‑1 (MQ=255) gCCGATGCGTTCCAAGGCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCt > 1:83192/1‑149 (MQ=255) cGATGCGTTCCAAGGCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTa > 7:207891/1‑149 (MQ=255) cGATGCGTTCCAAGGCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTa > 6:292746/1‑149 (MQ=255) cGATGCGTTCCAAGGCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTa < 3:278611/149‑1 (MQ=255) cAAGGCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAg > 8:120558/1‑149 (MQ=255) aaGGCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAgg < 4:129041/149‑1 (MQ=255) aGGCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAggg < 2:83192/149‑1 (MQ=255) ggCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGt < 2:212751/149‑1 (MQ=255) ccgatcagggcccccttgccacggttgttgtggtcgatggcggcacccgcgatggcaccggccagcgcgcccaaaccgccgtacttggcagtcttgctcatccctgtggagccCTGCGCCGGCCAGAACCCTTACGACAACCAGGGt < 8:305047‑M1/34‑1 (MQ=255) gatcagggcccccttgccacggttgttgtggtcgatggcggcacccgcgatggcaccggccagcgcgcccaaaccgccgtacttggcagtcttgctcatccctgtggagccCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAgg < 1:29806‑M1/38‑1 (MQ=255) cATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGgcg > 3:277362/1‑149 (MQ=255) ggcccccttgccacggttgttgtggtcgatggcggcacccgcgatggcaccggccagcgcgcccaaaccgccgtacttggcagtcttgctcatccctgtggagccCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAgg > 2:29806‑M1/106‑149 (MQ=255) aaacccTTGCGATCTGCCGCATTTATGAATTTCAGTATGAGCTTGTCAATGTTCACAATGCGTCTTAAGATTATAGTCGAAACCCCAGCTGCACTCATAAAAGCCTGCGACGTCCAGAACCCTTACGACAACCAGGGTCAGgcgcgtg > 8:336736/4‑145 (MQ=255) cccccttgccacggttgttgtggtcgatggcggcacccgcgatggcaccggccagcgcgcccaaaccgccgtacttggcagtcttgctcatccctgtggagccCTGCGCCGGCCAGAACCCTTACGACAACCAGCGTCAGGCGCAGGGc > 7:305047‑M1/104‑149 (MQ=255) aCCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTAACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATCACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAggg > 1:88233/1‑148 (MQ=255) cccTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTc < 4:277362/149‑1 (MQ=255) ccTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTc > 4:38881/1‑148 (MQ=255) cTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCca > 5:83482/1‑149 (MQ=255) gggATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCcaca < 7:120558/148‑1 (MQ=255) ggATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAgg < 8:207891/149‑1 (MQ=255) gATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAggg < 3:38881/149‑1 (MQ=255) gATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAgg > 5:190172/1‑148 (MQ=255) cTGCCGCATTTATGAATTTCAGTTGGAGCTTGTCCATGTTCAGCATGCGTCGTCTGATTATCGTCGCATCCGCCGCTGCACTGATGACCGGGTGCGCCGGCCAGAACCCTTAGGAGAACCAGGGTGAGGCGCAGGGCTCCACAGGGAt < 2:88233/148‑1 (MQ=255) gCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAg > 7:339533/1‑149 (MQ=255) ccGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGc < 5:292746/149‑1 (MQ=255) aTTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCa < 5:193194/126‑1 (MQ=255) aTTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCa > 6:193194/1‑126 (MQ=255) aTGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACg > 6:234072/1‑103 (MQ=255) aTGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACg < 5:234072/103‑1 (MQ=255) tGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGAGCGGCTGCGCCg < 2:303299/87‑1 (MQ=255) tGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGAGCGGCTGCGCCg > 1:303299/1‑87 (MQ=255) aaTTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCaa < 2:24531/149‑1 (MQ=255) tttCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGt < 6:83482/149‑1 (MQ=255) gCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTg > 5:67050/1‑149 (MQ=255) gCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTg > 3:64169/1‑149 (MQ=255) ttGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTggg > 5:293082/1‑149 (MQ=255) gTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGgcg > 7:251182/1‑149 (MQ=255) aTGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGAt < 3:55247/113‑1 (MQ=255) aTGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGAt > 4:55247/1‑113 (MQ=255) aTGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCt > 4:223768/1‑149 (MQ=255) cgtcgtCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCAt < 6:67050/149‑1 (MQ=255) gtcgtcTTATTATCGTCGCAACCGCAGCTGCACTGATGACCGGCTGCTCCGGCCATAACCCTTACGACAACCAGGGTCAGGCGCTGGGCTCCACATGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATc < 7:336736/149‑1 (MQ=255) tcTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCgg < 3:223768/149‑1 (MQ=255) gATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTg > 8:137780/1‑149 (MQ=255) gATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTg > 8:142455/1‑149 (MQ=255) aTTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGt < 8:339533/147‑1 (MQ=255) gtcgCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGTGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCAt < 8:251182/149‑1 (MQ=255) tcgCAACCGCCGCTGCACTGATGACCTGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGTGCGCGCTGGCCGGTGCCATCGCGGGTGACGACATc > 8:331155/1‑149 (MQ=255) tcgCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATc > 6:268940/1‑149 (MQ=255) gCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGa < 6:293082/149‑1 (MQ=255) gCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGa > 3:214438/1‑149 (MQ=255) tGCACTGATGACCGGCTGCGCCGGCAAGCACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCAACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACGAcc > 1:126251/1‑149 (MQ=255) cACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAAcc < 4:64169/147‑1 (MQ=255) cTGATGACCGGCTGCGCAGTCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTgg < 7:331155/149‑1 (MQ=255) ccGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAgggg < 5:268940/149‑1 (MQ=255) ggCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCg < 6:5539/124‑1 (MQ=255) ggCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCg > 5:5539/1‑124 (MQ=255) ggCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGc < 6:190172/149‑1 (MQ=255) CTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGccc > 4:214438‑M1/1‑149 (MQ=255) | GGAATTTTTCGTTGCCGATGCGTTCCAAGGCTGGCATAGAACCCCTTGGGATCTGCCGCATTTATGAATTTCAGTAGGAGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCTGCACTGATGACCGGCTGCGCCGGCCAGAACCCTTACGACAACCAGGGTCAGGCGCAGGGCTCCACAGGGATGAGCAAGACTGCCAAGTACGGCGGTTTGGGCGCGCTGGCCGGTGCCATCGCGGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGCCC > NC_002947/890741‑891032 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |