New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1260815	31 (0.560)	3 (0.060)	3/240	NT	8.8%	coding (636/2451 nt)	PP_1103	DEAD box family ATP‑dependent helicase
	?	NC_002947	= 1260846	33 (0.640)					coding (605/2451 nt)	PP_1103	DEAD box family ATP‑dependent helicase

TGGGCGCGGGTGTTGGTGAACACCAGGCTACTGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1260663‑1260815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcttgcTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCGATGC  <  NC_002947/1260846‑1260702                                                                                                                                                                                                                                                                                                            TGGGCGCGGGTGTTGGTGAACACCAGGCTACTGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTC                                                                                                                                                       >  5:172047/1‑149                                TGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCT                                                                                                                                                      <  5:60274/119‑1                                TGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCT                                                                                                                                                      >  6:60274/1‑119                                                  CGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGG                                                                                                         <  3:127095/146‑1                                                  CGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGG                                                                                                         >  4:127095/1‑146                                                   GTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAA                                                                                                           <  6:172047/143‑1                                                                                                                                                   GTCTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCG      <  1:342701/148‑1                                                                                                                                                    TCTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCGAT    <  3:329338/149‑1                                                                                                                                                    TCTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCGAT    <  8:7669/149‑1                                                                                                                                                        GCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCGATGC  <  6:103923/147‑1                                                                                                                                                                                                                                                                                                            TGGGCGCGGGTGTTGGTGAACACCAGGCTACTGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1260663‑1260815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcttgcTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCGATGC  <  NC_002947/1260846‑1260702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.