New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1416566	44 (0.790)	3 (0.060)	3/240	NT	6.2%	coding (936/1122 nt)	PP_1238	lipoprotein
	?	NC_002947	= 1416608	50 (0.960)					coding (978/1122 nt)	PP_1238	lipoprotein

TACCTGGGCTCCGACCTGGACCGCGCCTGGTCTGGCGTGGGCCGTGCCCTGGAGCAGGGTGGCGAATGGCGGGTTGAGGACATCAACCGCAGCCTGGGCCTGTACTACATCAACCTGTCCGAAAAGCCTGACGACAAGCAGAACCAGCCGGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1416411‑1416566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcttcACGCTCTTCCTTGGTCGGCTCGCTGCCGAACAGGCGGCTGAAGAAGCCCGGCTGGTTCTGCTTGTCGT  <  NC_002947/1416608‑1416541                                                                                                                                                                                                                                  TACCTGGGCTCCGACCTGGACCGCGCCTGGTCTGGCGTGGGCCGTGCCCTGGAGCAGGGTGGCGAATGGCGGGTTGAGGACATCAACCGCAGCCTGGGCCTGTACTACATCAACCTGTCCGAAAAGCCTGACGACAAGCAGAACCAGCC                                                                             >  6:345686/1‑149      GGGCTCCGACCTGGACCGCGCCTGGTCTGGCGTGGGCCGTGCCCTGGAGCAGGGTGGCGAATGGCGGGTTGAGGACATCAACCGCAGCCTGGGCCTGTACTACATCAACCTGTCCGAAAAGCCTGACGACAAGCAGAACCAGCCGGGCT                                                                        >  8:57590/1‑149            CGACCTGGACCGCGCCTGGTCTGGCGTGGGCCGTGCCCTGGAGCAGGGTGGCGAATGGCGGGTTGAGGACATCAACCGCAGCCTGGGCCTGTACTACATCAACCTGTCCGAAAAGCCTGACGACAAGCAGAACCAGCCGGGCTTCACGC                                                                  >  7:1943/1‑149                                                                             AGGACATCAACCGCAGCCTGGGCCTGTACTACATCAACCTGTCCGAAAAGCCTGACGACAAGCAGAACCAGCCGGGCTTCACGCTCTTCCTTGGTCGGCTCGCTGCCGAACCGGCGGCTGAAGAAGCCCGGCTGGTTCTGCTTGTCGT  <  8:1943/148‑1                                                                                        CGCAGCCTGGGCCTGTACTACATCAACCTGTCCGAAAAGCCTGACGACAAGCAGAACCAGCCGGGCTTCACGCTCTTCCTTGGTCGGCTCGCTGCCGAACAGGCGGCTGAAGA                          <  3:261705/113‑1                                                                                        CGCAGCCTGGGCCTGTACTACATCAACCTGTCCGAAAAGCCTGACGACAAGCAGAACCAGCCGGGCTTCACGCTCTTCCTTGGTCGGCTCGCTGCCGAACAGGCGGCTGAAGA                          >  4:261705/1‑113                                                                                                                                                                                                                                  TACCTGGGCTCCGACCTGGACCGCGCCTGGTCTGGCGTGGGCCGTGCCCTGGAGCAGGGTGGCGAATGGCGGGTTGAGGACATCAACCGCAGCCTGGGCCTGTACTACATCAACCTGTCCGAAAAGCCTGACGACAAGCAGAACCAGCCGGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1416411‑1416566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcttcACGCTCTTCCTTGGTCGGCTCGCTGCCGAACAGGCGGCTGAAGAAGCCCGGCTGGTTCTGCTTGTCGT  <  NC_002947/1416608‑1416541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.