| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1899371 = | 38 (0.690) | 3 (0.060) | 3/236 | NT | 7.8% | intergenic (+441/‑79) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase |
| ? | NC_002947 | 1899425 = | 36 (0.710) | intergenic (+495/‑25) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase | |||||
CCATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1899526‑1899371‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcctttTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAAC > NC_002947/1899425‑1899569 CCATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGG > 7:31913/1‑149 CATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGC > 5:100411/1‑149 GCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGA > 8:197723/1‑149 GCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCG < 7:297972/86‑1 GCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCG > 8:297972/1‑86 GGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGA > 4:114050/1‑149 CTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCAGCCCCTACTGCCGCGTGGGCTGCGGCATCGTCATGAGCCTTGCCCATGGCAAGGTAGGCAACATAAGCGGCGACAAACAGCACCCGATCAAC > 1:97939/1‑149 CCATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1899526‑1899371‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcctttTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAAC > NC_002947/1899425‑1899569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |