| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1923666 | 39 (0.700) | 3 (0.060) | 3/240 | NT | 6.3% | coding (374/795 nt) | PP_1723 | 2‑aminoethylphosphonate ABC transporter permease |
| ? | NC_002947 | = 1923711 | 52 (1.000) | coding (329/795 nt) | PP_1723 | 2‑aminoethylphosphonate ABC transporter permease | |||||
GCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGATGGCCTGCAGGTTGTTGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATGGCCATCGGCCCGCTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1923513‑1923666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccatTCGCGGTCCCGCCGGTGGTGTCGTCGGTGGGGCTGCTGCAGCTGTATGGCAGCGGGCCGATGGCCATGGTCGGCACACCGTGGATCCTGATCGGCTGCTACTTCACCATCGCCCTGCCGTTCATGTACAGGGCCATCACCAACAACCT < NC_002947/1923711‑1923564 GCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGATGGCCTGCGGGTTGTTGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATGGCCATCGGCCCGCT > 5:180836/1‑149 GCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGATGGCCTGCAGGTTGTTGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATGGCCATCGGCCCGCTGC < 8:171033/149‑1 TGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATGGCCATCGGCCCGCTGCC > 5:119945/1‑94 TGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATGGCCATCGGCCCGCTGCC < 6:119945/94‑1 TGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATGGCCATCGGCCCGCTGCCATTCGCGGTCCCGCCGGTGGTGTCGTCGGTGGGGCTGCTGCAGCTGTATGGCAGCGGG < 8:187246/149‑1 CCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATGGCCATCGGCCCGCTGCCATTCGCGGTCCCGCCGGTGGTGTCGTCGGTGGGGCTGCTGCAGCTGTATGGCAGCGG > 3:680/1‑141 CCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATGGCCATCGGCCCGCTGCCATTCGCGGTCCCGCCGGTGGTGTCGTCGGTGGGGCTGCTGCAGCTGTATGGCAGCGG < 4:680/141‑1 TGCCATTCGCGGTCCCGCCGGTGGTGTCGTCGGTGGGGCTGCTGCAGCTGTATGGCAGCGGGCCGATGGCCATGGTCGGCACACCGTGGATCCTGATCGGCTGCTACTTCACCATCGCCCTGCCGTTCATGTACAGGGCCATCACCAA > 1:324210/1‑148 TTCGCGGTCCCGCCGGTGGTGTCGTCGGTGGGGCTGCTGCAGCTGTATGGCAGCGGGCCGATGGCCATGGTCGGCACACCGTGGATCCTGATCGGCTGCTACTTCACCATCGCCCTGCCGTTCATGTACAGGGCCATCACCAACAACCT > 5:74292/1‑149 TTCGCGGTCCCGCCGGTGGTGTCGTCGGTGGGGCTGCTGCAGCTGTATGGCAGCGGGCCGATGGCCATGGTCGGCACACCGTGGATCCTGATCGGCTGCTACTTCACCATCGCCCTGCCGTTCAT < 3:3090/125‑1 TTCGCGGTCCCGCCGGTGGTGTCGTCGGTGGGGCTGCTGCAGCTGTATGGCAGCGGGCCGATGGCCATGGTCGGCACACCGTGGATCCTGATCGGCTGCTACTTCACCATCGCCCTGCCGTTCAT > 4:3090/1‑125 GCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGATGGCCTGCAGGTTGTTGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATGGCCATCGGCCCGCTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1923513‑1923666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccatTCGCGGTCCCGCCGGTGGTGTCGTCGGTGGGGCTGCTGCAGCTGTATGGCAGCGGGCCGATGGCCATGGTCGGCACACCGTGGATCCTGATCGGCTGCTACTTCACCATCGCCCTGCCGTTCATGTACAGGGCCATCACCAACAACCT < NC_002947/1923711‑1923564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |