| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1937410 = | 50 (0.900) | 4 (0.080) | 4/242 | NT | 8.8% | coding (274/747 nt) | PP_1737 | hypothetical protein |
| ? | NC_002947 | 1937440 = | 36 (0.690) | coding (244/747 nt) | PP_1737 | hypothetical protein | |||||
CTCAACCCTGCAGGCGCTGAACGTGTACGACCCGCTGGAGTCGATCAACCGGCGCATCTACCACTTCAACTACCGATTGGACCAATGGGTGCTGCTGCCGCTGGTGAATGGCTATCAGTATGTCACCCCAAGCTTCGTGCGCACGGGGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1937561‑1937410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggtgaCATACTGATAGCCATTCACCAGCGGCAGCAGCACCCATTGGTCCAATCGGTAGTTGAAGTGGTAGATGCGCCGGTTGATCGACTCCAGCGGGTCGTACAC > NC_002947/1937440‑1937539 CTCAACCCTGCAGGCGCTGAACGTGTACGACCCGCTGGAGTCGATCAACCGGCGCATCTACCACTTCAACTACCGATTGGACCAATGGGTGCTGCTGCCGCTGGTGAATGGCTATCAGTATGTCACCCCAAGCTTCGTGCGCACGGGGG > 3:70817/1‑149 AACCCTGCAGGCGCTGAACGTGTACGACCCGCTGGAGTCGATCAACCGGCGCATCTACCACTTCAACTACCGATTGGACCAATGGGTGCTGCTGCCGCTGGTGAATGGCTATCAGTATGTCACCCCAAGCTTCGTGCGCACGGGGGTG < 1:275730/148‑1 AACCCTGCAGGCGCTGAACGTGTACGACCCGCTGGAGTCGATCAACCGGCGCATCTACCACTTCAACTACCGATTGGACCAATGGGTGCTGCTGCCGCTGGTGAATGGCTATCAGTATGTCACCCCAAGCTTCGTGCGCACGGGGGT > 8:4795/1‑147 GTATGTCACCCCAAGCTTCGTGCGCACGGGGGTGACATACTGATAGCCATTCACCAGCGGCAGCAGCACCCATTGGTCCAATCGGTAGTTGAAGTGGTAGATGCGCCGGTTGATCGACTCCAGCGGGTCGTACAC > 1:214078/1‑135 GTATGTCACCCCAAGCTTCGTGCGCACGGGGGTGACATACTGATAGCCATTCACCAGCGGCAGCAGCACCCATTGGTCCAATCGGTAGTTGAAGTGGTAGATGCGCCGGTTGATCGACTCCAGCGGGTCGTACAC < 2:214078/135‑1 GTCACCCCAAGCTTCGTGCGCACGGGGGTGACATACTGATAGCCATTCACCAGCGGCAGCAGCACCCATTGGTCCAATCGGTAGTTGAAGTGGTAGATGCGCCGGTTGATC > 5:282594/1‑111 GTCACCCCAAGCTTCGTGCGCACGGGGGTGACATACTGATAGCCATTCACCAGCGGCAGCAGCACCCATTGGTCCAATCGGTAGTTGAAGTGGTAGATGCGCCGGTTGATC < 6:282594/111‑1 CTCAACCCTGCAGGCGCTGAACGTGTACGACCCGCTGGAGTCGATCAACCGGCGCATCTACCACTTCAACTACCGATTGGACCAATGGGTGCTGCTGCCGCTGGTGAATGGCTATCAGTATGTCACCCCAAGCTTCGTGCGCACGGGGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1937561‑1937410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggtgaCATACTGATAGCCATTCACCAGCGGCAGCAGCACCCATTGGTCCAATCGGTAGTTGAAGTGGTAGATGCGCCGGTTGATCGACTCCAGCGGGTCGTACAC > NC_002947/1937440‑1937539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |