| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2117745 = | 43 (0.780) | 4 (0.080) | 4/246 | NT | 8.5% | coding (1421/2466 nt) | PP_1884 | hypothetical protein |
| ? | NC_002947 | 2117773 = | 45 (0.850) | coding (1449/2466 nt) | PP_1884 | hypothetical protein | |||||
AACAGGCAATGTCGCGGGGCATGTGCCGCTCGCCTGCGAGTATCGCGCCACCAAAGTTCAGTTTGATGGTCTTATCGATCAATTCCTCCATGTACAGGTCTAAACGAAGGTCCTTGGCGAGTGCGG‑‑CTCTTGCTGCGGCAAGGGGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2117894‑2117745‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcACTCGCCAAGGACCTTCGTTTAGACCTGTACATGGAGGAATTGATCGATAAGACCATCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACC > NC_002947/2117773‑2117920 AACAGGCAATGTCGCGGGGCATGTGCCGCTCGCCTGCGAGTATCGCGCCACCAAAGTTCAGTTTGATGGTCTTATCGATCAATTCCTCCATGTACAGGTCTAAACGAAGGTCCTTGGCGAGTGCGG‑‑CTCTTGCTGCGGCAAGGGGGCCG < 5:163492/149‑1 ACAGGCAATGTCGCGGGGCATGTGCCGCTCGCCTGCGAGTATCGCGCCACCAAAGTTCAGTTTGATGGTCTTATCGATCAATTCCTCCATGTACAGGTCTAAACGAAGGTCCTTGGCGAGTGCGG‑‑CTCTTGCTGCGGCAAGGGGGCCGC > 5:29350/1‑149 GCATGTGCCGCTCGCCTGCGAGTATCGCGCCACCAAAGTTCAGTTTGATGGTCTTATCGATCAATTCCTCCATGTACAGGTCTAAACGAAGGTCCTTGGCGAGTGCGGCCCCCTTGCCGCAGCAA‑‑GAGCCGCACTCGCCAAGGACCTTC < 5:97973/149‑1 CGCTCGCCTGCGAGTATCGCGCCACCAAAGTTCAGTTTGATGGTCTTATCGATCAATTCCTCCATGTACAGGTCTAAACGAAGGTCCTTGGCGAGTGCGGCCCCCTTGCCGCAGCAA‑‑GAGCCGCACTCGCCAAGGA < 1:146327/136‑1 CGCTCGCCTGCGAGTATCGCGCCACCAAAGTTCAGTTTGATGGTCTTATCGATCAATTCCTCCATGTACAGGTCTAAACGAAGGTCCTTGGCGAGTGCGGCCCCCTTGCCGCAGCAA‑‑GAGCCGCACTCGCCAAGGA > 2:146327/1‑136 GAGTGCGG‑‑CTCTTGCTGCGGCAAGGGGGCCGCACTCGCCAAGGACCTTCGTTTAGACCTGTACATGGAGGAATTGATCGATAAGACCATCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGC < 6:97973/149‑1 CCGCACTCGCCAAGGACCTTCGTTTAGACCTGTACATGGAGGAATTGATCGATAAGACCATCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCT > 4:162188/1‑148 GCACTCGCCAAGGACCTTCGTTTAGACCTGTACATGGAGGAATTGATCGATAAGACCATCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGAC < 3:75004/149‑1 CACTCGCCAAGGACCTTCGTTTAGACCTGTACATGGAGGAATTGATCGATAAGACCATCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACC < 4:159637/149‑1 CACTCGCCAAGGACCTTCGTTTAGACCTGTACATGGAGGAATTGATCGATAAGACCATCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACC < 4:325090/149‑1 AACAGGCAATGTCGCGGGGCATGTGCCGCTCGCCTGCGAGTATCGCGCCACCAAAGTTCAGTTTGATGGTCTTATCGATCAATTCCTCCATGTACAGGTCTAAACGAAGGTCCTTGGCGAGTGCGG‑‑CTCTTGCTGCGGCAAGGGGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2117894‑2117745‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcACTCGCCAAGGACCTTCGTTTAGACCTGTACATGGAGGAATTGATCGATAAGACCATCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACC > NC_002947/2117773‑2117920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |