| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2117966 = | 41 (0.740) | 3 (0.060) | 3/244 | NT | 6.9% | coding (1642/2466 nt) | PP_1884 | hypothetical protein |
| ? | NC_002947 | 2118004 = | 42 (0.800) | coding (1680/2466 nt) | PP_1884 | hypothetical protein | |||||
GTAAATTCACCTTCGATGCCCGTGGCCCCGGGCGCCAGATACAGGCCATGGGTGTGTTGGTCGAAATGGCCCGGGTCATCCGAGGAGCCCTCTACCGACTCGGCCGACCAGGTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2118117‑2117966‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgtAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAAGGTGAATTTACCAGGGTGCGTGTCACTGCCACTGTTCCAGGCTC > NC_002947/2118004‑2118150 GTAAATTCACCTTCGATGCCCGGGGCCCCGGGCGCCAGATACAGGCCATGGGTGTGTTGGTCGAAATGGCCCGGGTCATCCGAGGAGCCCTCTACCGACTCGGCCGACCAGGTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAA < 5:366556/149‑1 AAATTCACCTTCGATGCCCGTGGCCACGGGCGCCAGATACAGGCTATGGGTGTGTTGGTCGAAATGGCCCGGGTCATCCGAGGAGCCCTCTACCGACTCGGCCGACCAGGTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAACG > 7:120392/1‑149 AATTCACCTTCGATGCCCGTGGCCCCGGGCGCCAGATACAGGCCATGGGTGTGTTGGTCGAAATGGCCCGGGTCATCCGAGGAGCCCTCTACCGACTCGGCCGACCAGGTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAACGT < 3:186636/149‑1 CATGGGTGTGTTGGTCGAAATGGCCCGGGTCATCCGAGGAGCCCTCTACCGACTCGGCCGACCAGGTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAAC > 5:74093/1‑104 CATGGGTGTGTTGGTCGAAATGGCCCGGGTCATCCGAGGAGCCCTCTACCGACTCGGCCGACCAGGTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAAC < 6:74093/104‑1 ctagtTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAA < 1:126369/143‑1 GGTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCTTCGAA > 2:126369/1‑145 GTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACAAATGACCTGTATCTGGCGCCAGGCGCCACGGGCATCGAAGCTG > 8:151411/1‑148 GTAACCTGGTCTGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGTCGCCCGGGGCCACGGGCATCGAAGGTGAAGTTACGAGGGTGCGTGTCACTGCCACTGTTCCAGGCT > 6:255600/1‑148 GTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAAGGTGAATTTACCAGGGTGCGTGTCACTGCCACTGTTCCAGGCTC < 7:151411/149‑1 GTAAATTCACCTTCGATGCCCGTGGCCCCGGGCGCCAGATACAGGCCATGGGTGTGTTGGTCGAAATGGCCCGGGTCATCCGAGGAGCCCTCTACCGACTCGGCCGACCAGGTTACGTTGGCTTGCGCCGGGACGGTGGCAAGCTGCAACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2118117‑2117966‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgtAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAAGGTGAATTTACCAGGGTGCGTGTCACTGCCACTGTTCCAGGCTC > NC_002947/2118004‑2118150 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |