New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2117966 =	41 (0.740)	3 (0.060)	3/244	NT	6.9%	coding (1642/2466 nt)	PP_1884	hypothetical protein
	?	NC_002947	2118004 =	42 (0.800)					coding (1680/2466 nt)	PP_1884	hypothetical protein

GATAAGACCATCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAAGGTGAATT  >  NC_002947/2117819‑2118114                                                                                                                                                    |                                                                                                                                                     gagcctggaacagtggcagtgacacgcaccctggtaaattcaccttcgatgcccgtggccccgggcgccagatacaggccatgggtgtgttggtcgaaatggcccgggtcatccgaggagccctctaccgactcggccgaccaggttAc                                                                                                                                                     <  7:151411‑M1/2‑1 (MQ=255)  agcctggaacagtggcagtgacacgcaccctcgtaacttcaccttcgatgcccgtggccccgggcgacagatacaggccatgggtgtgttggtcgaaatggcccgggtcatccgaggagccctctaccgactcggcagaccaggttAc                                                                                                                                                     >  6:255600‑M1/147‑148 (MQ=255)  aTAAGACCATCAAACTGAAATTTGGTGGCGCGATACTCGCAGGCGAGCTGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACg                                                                                                                                                    >  6:234007/1‑149 (MQ=255)           tCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCtt                                                                                                                                           >  3:224904/1‑149 (MQ=255)             aaaCTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTg                                                                                                                                          <  5:80609/148‑1 (MQ=255)                  gAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGATCGCCGTCACCCCCCTGGAAAAAAACGTCACCCACGGCAGCACGATCCAGCATaccacc                                                                                                                                     >  2:150443/1‑148 (MQ=255)                     cTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTcc                                                                                                                                 >  1:55219/1‑149 (MQ=255)                                   tACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAAc                                                                                                                   <  5:47188/149‑1 (MQ=255)                                      tCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCCCGGCAGCACGTTGc                                                                                                                                                >  5:298314/1‑117 (MQ=255)                                      tCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCCCGGCAGCACGTTGc                                                                                                                                                <  6:298314/117‑1 (MQ=255)                                      tCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGt                                                                                                                 >  8:209772/1‑148 (MQ=255)                                      tCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGt                                                                                                                 >  2:83873/1‑148 (MQ=255)                                        gCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGc                                                                                                                       >  4:104335/1‑140 (MQ=255)                                        gCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGc                                                                                                                       <  3:104335/140‑1 (MQ=255)                                         cagcttcgatgcccgtggcgcctggcgccagatacaggtcatttgtgtgttggtcgaaatggcccgggtcatccgaggagccctctaccgactcggccgaccaggttACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAAc                                                                                                              >  8:151411‑M1/108‑148 (MQ=255)                                             ttcgatgcccgtggccccgggcgccagatacaggccatgggtgtgttggtcgaaatggcccgggtcatccgaggagccctctaccgactcggccgaccaggttACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCaacgtaaactag                                                                                                          <  1:126369‑M1/45‑6 (MQ=255)                                             ttcgaagcccgtggccccgggcgccagatacaggccatgggtgtgttggtcgaaatggcccgggtcatccgaggagccctctaccgactcggccgaccaggttACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAAcc                                                                                                             >  2:126369‑M1/104‑145 (MQ=255)                                                  ggCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGcc                                                                                                    <  2:77134/149‑1 (MQ=255)                                                      caTGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGt                                                                                                <  7:209772/149‑1 (MQ=255)                                                         gCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGGCGGCCGAGTCgg                                                                                             >  8:120392/1‑149 (MQ=255)                                                              gcgACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCAGTCCCCCCCCTGGAAAAAATCGTGCCCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGttgcg                                                                                        >  1:83575/1‑145 (MQ=255)                                                                       ccTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGctcctc                                                                                <  5:234007/148‑1 (MQ=255)                                                                        cTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCga                                                                              >  3:307387/1‑148 (MQ=255)                                                                                 cggagTCGCTCCACAGCTGACCAGGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCgg                                                                     <  5:232186/149‑1 (MQ=255)                                                                                          tCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAAc                                                                                                                   >  8:263978/1‑94 (MQ=255)                                                                                          tCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAAc                                                                                                                   <  7:263978/94‑1 (MQ=255)                                                                                            cacaGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGAc                                                          >  8:277604/1‑149 (MQ=255)                                                                                             acaGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGAcc                                                         <  1:150443/149‑1 (MQ=255)                                                                                                gCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAac                                                      <  4:224904/149‑1 (MQ=255)                                                                                                  tGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGAc                                                          <  1:210219/143‑1 (MQ=255)                                                                                                  tGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGAc                                                          >  2:210219/1‑143 (MQ=255)                                                                                                    aCCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTagag                                                                                        >  4:135520/1‑111 (MQ=255)                                                                                                    aCCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTagag                                                                                        <  3:135520/111‑1 (MQ=255)                                                                                                      cACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACAcc                                                 >  8:192692/1‑148 (MQ=255)                                                                                                             gCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGAt                                                                            >  3:6558/1‑114 (MQ=255)                                                                                                             gCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGAt                                                                            <  4:6558/114‑1 (MQ=255)                                                                                                               cGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTg                                        >  2:100200/1‑148 (MQ=255)                                                                                                                  cACCCCCCTGGAAAAAATCGTGACCCTCGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATc                                    >  1:10614/1‑149 (MQ=255)                                                                                                                    ccccccTCGAAAAAATCGTCACCCACGGCAGCCCGTTCCAGCTTGCCACCGTCCCGGCGCACGCCAACGTAACCGGCGCGGCCCAGTCGGTAGAGGGCTCCTCGGAAGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTg                                  <  4:22602/149‑1 (MQ=255)                                                                                                                     cccccTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTgg                                 >  5:3581/1‑149 (MQ=255)                                                                                                                            gAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCgg                          >  4:116294/1‑149 (MQ=255)                                                                                                                              aaaaaTCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCgggg                        <  1:100200/149‑1 (MQ=255)                                                                                                                                     gTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACggg                 <  7:277604/149‑1 (MQ=255)                                                                                                                                          ccACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATc             >  7:129140/1‑148 (MQ=255)                                                                                                                                          ccACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATc             >  4:213202/1‑148 (MQ=255)                                                                                                                                           cACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCCAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCg            >  8:118809/1‑148 (MQ=255)                                                                                                                                              ggCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTC‑GATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAAGGt       <  4:307387/149‑1 (MQ=255)                                                                                                                                                 agcaCGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAAGGTGa     <  3:213202/149‑1 (MQ=255)                                                                                                                                                   caCGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAAGGGGAAt   >  8:331830/1‑149 (MQ=255)                                                                                                                                                    ACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAAGGTGAAtt  <  3:186636‑M1/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GATAAGACCATCAAACTGAACTTTGGTGGCGCGATACTCGCAGGCGAGCGGCACATGCCCCGCGACATTGCCTGTTTTGGCGGCGTCGCTCCACAGCTGACCACGTTCGCCGTCACCCCCCTGGAAAAAATCGTGACCCACGGCAGCACGTTGCAGCTTGCCACCGTCCCGGCGCAAGCCAACGTAACCTGGTCGGCCGAGTCGGTAGAGGGCTCCTCGGATGACCCGGGCCATTTCGACCAACACACCCATGGCCTGTATCTGGCGCCCGGGGCCACGGGCATCGAAGGTGAATT  >  NC_002947/2117819‑2118114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.