New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2774442 = | 46 (0.830) | 3 (0.060) | 3/246 | NT | 6.6% | coding (1070/1353 nt) | PP_5521 | hypothetical protein |
? | NC_002947 | 2774487 = | 41 (0.770) | coding (1025/1353 nt) | PP_5521 | hypothetical protein |
CGCCGGTGACCAGTTGATCGTCAATGCCTGCCATTTCTACAGCGGTGCCACGCTGGCCGTGAGGGTGGCAGACCTGCACGGGCTGGATACCGATTACTACAGCCAGGACCCGCGTACCCCGCTGGTGCAGGATGGCGCAAGGGTGTATGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2774594‑2774442 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggTCCTGGCTGTAGTAATCGGTATCCAGCCCGTGCAGGTCTGCCACCCTCACGGCCAGCGTGGCACCGCTGTAGAAATGGCAGGCATTGACGATCAACTG > NC_002947/2774487‑2774584 CGCCGGTGACCAGTTGATCGTCAATGCCTGCCATTTCTACAGCGGTGCCACGCTGGCCGTGAGGGTGGCAGACCTGCACGGGCTTGATACCGATTACTACAGCCAGGACCCGCGTACCCCGCTGGTGCAGGATGGCGCAAGGGTGTATG > 8:187232/1‑149 CGCCGGTGACCAGTTGATCGTCAATGCCTGCCATTTCTACAGCGGTGCCACGCTGGCCGTGAGGGTGGCAGACCTGCACGGGCTGGATACCGATTACTACAGCCAGGACCCGCGTACCCCGCTGGTGCAGGATGGCGCAAGGGTGTATG < 5:86811/149‑1 CCAGGACCCGCGTACCCCGCTGGTGCAGGATGGCGCAAGGGTGTATGCGGGTCCTGGCTGTAGTAATCGGTATCCAGCCCGTGCAGGTCTGCCACCCTCACGGCCAGCGTGGCACCGCTGTAGAAATGGCAGGCATTGACGATCAACTG > 6:306026/1‑149 ACCCGCGTACCCCGCTGGTGGAGGATGGCGCAAGGGTGTATGCGGGTCCTGGCTGTAGTAATCGGTATCCAGCCCGTGCAGGTCTGCCACCCTCACGGCCAGCGTGGCACCGCTGT > 4:240648/1‑116 ACCCGCGTACCCCGCTGGTGCAGGATGGCGCAAGGGTGTATGCGGGTCCTGGCTGTAGTAATCGGTATCCAGCCCGTGCAGGTCTGCCACCCTCACGGCCAGCGTGGCACCGCTGT < 3:240648/116‑1 CGCCGGTGACCAGTTGATCGTCAATGCCTGCCATTTCTACAGCGGTGCCACGCTGGCCGTGAGGGTGGCAGACCTGCACGGGCTGGATACCGATTACTACAGCCAGGACCCGCGTACCCCGCTGGTGCAGGATGGCGCAAGGGTGTATGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2774594‑2774442 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggTCCTGGCTGTAGTAATCGGTATCCAGCCCGTGCAGGTCTGCCACCCTCACGGCCAGCGTGGCACCGCTGTAGAAATGGCAGGCATTGACGATCAACTG > NC_002947/2774487‑2774584 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |