| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2959898 = | 50 (0.900) | 5 (0.090) | 5/244 | NT | 10.1% | coding (1294/2316 nt) | PP_2590 | ferric siderophore receptor |
| ? | NC_002947 | 2959939 = | 41 (0.780) | coding (1253/2316 nt) | PP_2590 | ferric siderophore receptor | |||||
CCAGCAAGACGGACTATCGCTACAGCGGCGCACTCACAGCAACGGTGAACAACAGCGCCGGTGATTTCACCACCGCGATGGGCCAGTTGCAGATGGAGATCCACAAGACTTCTGCCGAGGTGGGGCTGCGTGGCCATTTCGACACCTTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2960050‑2959898‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcaGAAGTCTTGTGGATCTCCATCTGCAACTGGCCCATCGCGGTGGTGAAATCACCGGCGCTGTTGTTCACCGTTGCTGTGAGTGCGCCGCTGTAGCGATAGTCCGTCTTGCTGGTGCCGACCGCGCCATA > NC_002947/2959939‑2960066 CCAGCAAGACGGACTATCGCTACAGCGGCGCACTCACAGCAACGGTGAACAACAGCGCCGGTGATTTCACCACCGCGATGGGCCAGTTGCAGATGGAGATCCACAAGACTTCTGCCGAGGTGGGGCTGCGTGGCCATTTCGACACCTTC > 4:12922/1‑149 TTCTGCCGAGGTGGGGCTGCGTGGCCATTTCGACACCTTCGGCAGAAGTCTTGTGGATCTCCATCTGCAACTGGCCCATCGCGGTGGTGAAATCACCGGCGCTGTTGTTCACCGTTGCTGTGAGTGCGCCGCTGTAGCGATAGTCCGTC > 2:136689/1‑149 GCCGAGGTGGGGCTGCGTGGCCATTTCGACACCTTCGGCAGAAGTCTTGTGGATCTCCATCTGCAACTGGCCCATCGCGGTGGTGAAATCACCGGCGCTGTTGTTCACCGTTGCTGTGAGTGCGCCGCTGTAGCGATAGTCCGTCTTGC > 1:185993/1‑149 CCGAGGTGGGGCTGCGTGGCCATTTCGACACCTTCGGCAGAAGTCTTGTGGATCTCCATCTGCAACTGGCCCATCGCGGTGGTGAAATCACCGGCGCTGTTGTTCACCGTTGCTGTGAGTGCGCCGCTGTAGCGATAGTCCGTCTTG > 3:99405/1‑147 CCGAGGTGGGGCTGCGTGGCCATTTCGACACCTTCGGCAGAAGTCTTGTGGATCTCCATCTGCAACTGGCCCATCGCGGTGGTGAAATCACCGGCGCTGTTGTTCACCGTTGCTGTGAGTGCGCCGCTGTAGCGATAGTCCGTCTTG < 4:99405/147‑1 GCCATTTCGACACCTTCGGCAGAAGTCTTGTGGATCTCCATCTGCAACTGGCCCATCGCGGTGGTGAAATCACCGGCGCTGTTGTTCACCGTTGCTGTGAGTGCGCCGCTGTAGCGATAGTCCGTCTTGCTGGTGCCGACCGCGCCATA < 1:136689/149‑1 CCAGCAAGACGGACTATCGCTACAGCGGCGCACTCACAGCAACGGTGAACAACAGCGCCGGTGATTTCACCACCGCGATGGGCCAGTTGCAGATGGAGATCCACAAGACTTCTGCCGAGGTGGGGCTGCGTGGCCATTTCGACACCTTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2960050‑2959898‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcaGAAGTCTTGTGGATCTCCATCTGCAACTGGCCCATCGCGGTGGTGAAATCACCGGCGCTGTTGTTCACCGTTGCTGTGAGTGCGCCGCTGTAGCGATAGTCCGTCTTGCTGGTGCCGACCGCGCCATA > NC_002947/2959939‑2960066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |