| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2966245 | 56 (1.010) | 4 (0.070) | 4/248 | NT | 6.8% | coding (382/1758 nt) | PP_2595 | ABC transporter permease/ATP‑binding protein |
| ? | NC_002947 | = 2966269 | 55 (1.030) | coding (358/1758 nt) | PP_2595 | ABC transporter permease/ATP‑binding protein | |||||
CCCAGGCGTGCGCTGAACAGCAGCACTGCAGCCAGCGCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCAAGGGCGTGAGCA‑CATGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2966097‑2966245‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcACGATGGCTGTGGCCCAACTGCCGGCCCATGTGCTCACGCCCTTGATCAGTAGCAGCGTCACGCCGCTGGTGCTGTTGGTTGCGCTGTTCATCCTGCACCCGCCGCTGGGGCTTGTCGCCCTGCTAGCGCTGCCGGCGCTGGCTGCAG < NC_002947/2966269‑2966122 CCCAGGCGTGCGCTGAACAGCAGCACTGCAGCCAGCGCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCAAGGGCGTGAGCA‑CATGGGC < 7:139051/149‑1 AGCGCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCAAGGGCGTGAGCA‑CATGGGCACGATGGCTGTGGCCCAACTGCCGGCCCATGTG < 1:256731/149‑1 GCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCAAGGGCGTGAGCA‑CATGGGCACGATGGCTGTGGCCCAACTGCCGGCCCATG > 3:119998/1‑144 GCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCAAGGGCGTGAGCA‑CATGGGCACGATGGCTGTGGCCCAACTGCCGGCCCATG < 4:119998/144‑1 GCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCCCCAGCGGCGTGACGCTGCTACTGATCAAGGGCGTGATCACCCAGGGCACGATGGCTGTGGCCCAACTGCCGGCCCATGTGCTCACG < 7:189099/149‑1 AGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCAAGGGCGTGAGCA‑CATGGGC < 5:342917/98‑1 AGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCAAGGGCGTGAGCA‑CATGGGC > 6:342917/1‑98 GGCACGATGGCTGTGGCCCAACTGCCGGCCCATGTGCTCACGCCCTTGATCAGTAGCAGCGTCACGCCGCTGGTGCTGTTGGTTGCGCTGTTCATCCTGCACCCGCCGCTG < 5:363923/111‑1 GGCACGATGGCTGTGGCCCAACTGCCGGCCCATGTGCTCACGCCCTTGATCAGTAGCAGCGTCACGCCGCTGGTGCTGTTGGTTGCGCTGTTCATCCTGCACCCGCCGCTG > 6:363923/1‑111 GCACGATGGCTGTGGCCCAACTGCCGGCCCATGTGCTCACGCCCTTGATCAGTAGCAGCGTCACGCCGCTGGTGCTGTTGGTTGCGCTGTTCATCCTGCACCCGCCGCTGGGGCTTGTCGCCCTGCTAGCGCTGCCGGCGCTGGCTGCA < 7:24133/149‑1 CACGATGGCTGTGGCCCAACTGCCGGCCCATGTGCTCACGCCCTTGATCAGTAGCAGCGTCACGCCGCTGGTGCTGTTGGTTGCGCTGTTCATCCTGCACCCGCCGCTGGGGCTTGTCGCCCTGCCAGCGCTGCCGGCGCTGGCTGCAG > 8:231913/1‑149 CCCAGGCGTGCGCTGAACAGCAGCACTGCAGCCAGCGCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCAAGGGCGTGAGCA‑CATGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2966097‑2966245‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcACGATGGCTGTGGCCCAACTGCCGGCCCATGTGCTCACGCCCTTGATCAGTAGCAGCGTCACGCCGCTGGTGCTGTTGGTTGCGCTGTTCATCCTGCACCCGCCGCTGGGGCTTGTCGCCCTGCTAGCGCTGCCGGCGCTGGCTGCAG < NC_002947/2966269‑2966122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |