New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2966245	56 (1.010)	4 (0.070)	4/248	NT	6.8%	coding (382/1758 nt)	PP_2595	ABC transporter permease/ATP‑binding protein
	?	NC_002947	= 2966269	55 (1.030)					coding (358/1758 nt)	PP_2595	ABC transporter permease/ATP‑binding protein

CTGCAGCCAGCGCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCC  >  NC_002947/2966122‑2966408                                                                                                                                                      |                                                                                                                                            cTGCAGCCAGCGCCGGCAGCGCTGGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTg                                                                                                                                            >  8:231913‑M2/1‑148 (MQ=255)  tGCAGCCAGCGCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTgc                                                                                                                                           <  7:24133‑M2/149‑3 (MQ=255)        cagcGCCGGCAGCGCTAGCAGGGCGACACGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTggg                                                                                                                                     <  3:206426/149‑1 (MQ=255)         agcGCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGt                                                                                                                                    <  5:98096/149‑1 (MQ=255)                          cAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGa                                                                                                                                  >  6:253842/1‑134 (MQ=255)                          cAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGa                                                                                                                                  <  5:253842/134‑1 (MQ=255)                          cAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGAGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTgtggga                                                                                                                                  <  5:253847/134‑6 (MQ=255)                             ggCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCcgcg                                                                                                                >  6:1943/1‑149 (MQ=255)                                gACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACACTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCgg                                                                                                             >  1:282717/1‑149 (MQ=255)                                 aCAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGgt                                                                                                            >  2:180790/1‑149 (MQ=255)                                    aGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGtgtt                                                                                                         <  8:24133/149‑1 (MQ=255)                                     gCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGtgttg                                                                                                        >  7:252569/1‑149 (MQ=255)                                      ccccAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGtgttgt                                                                                                       >  7:173669/1‑149 (MQ=255)                                       cccAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGtgttgt                                                                                                       >  1:295191/1‑148 (MQ=255)                                       cccAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGtgttgt                                                                                                       >  4:115427/1‑148 (MQ=255)                                        ccAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCa                                                                                                     <  3:115427/149‑1 (MQ=255)                                         cAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTgcc                                                                                                                                          <  5:363923‑M2/111‑4 (MQ=255)                                         cAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTgcc                                                                                                                                          >  6:363923‑M2/1‑108 (MQ=255)                                         cAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAg                                                                                                    >  1:116353/1‑149 (MQ=255)                                                  gTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGc                                                                                                                          >  5:248557/1‑118 (MQ=255)                                                  gTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGc                                                                                                                          <  6:248557/118‑1 (MQ=255)                                                   tGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGaacc                                                                                           >  6:32085/1‑148 (MQ=255)                                                      aGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGaaccaacc                                                                                       >  1:147438/1‑149 (MQ=255)                                                      aGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGaaccaacc                                                                                       <  8:173669/149‑1 (MQ=255)                                                       ggATGAACAGCGCAACCAACAGCACCATCGGCGTGACGCTGCTACTTATCACATATCGTGAGCTATTGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGaaccaacc                                                                                       <  1:294682/149‑1 (MQ=255)                                                        gATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCa                                                                                     <  6:140134/149‑1 (MQ=255)                                                            aaCAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTgg                                                                                 <  5:269712/149‑1 (MQ=255)                                                            aaCAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTg                                                                                  <  1:180790/148‑1 (MQ=255)                                                            aaCAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTg                                                                                  <  2:116353/148‑1 (MQ=255)                                                              cAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTgg                                                                                 >  3:156725/1‑147 (MQ=255)                                                                   caaccaacAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCtgt                                                                          <  5:32085/149‑1 (MQ=255)                                                                       caacAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACGGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTa                                                                      >  2:343025/1‑149 (MQ=255)                                                                         acAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTg                                                                                  >  3:133660/1‑135 (MQ=255)                                                                         acAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTg                                                                                  <  4:133660/135‑1 (MQ=255)                                                                           aGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACGGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTg                                                                  <  1:343025/149‑1 (MQ=255)                                                                                  gcggcgTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCa                                                                                                     <  5:54474/107‑1 (MQ=255)                                                                                  gcggcgTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCa                                                                                                     >  6:54474/1‑107 (MQ=255)                                                                                  gcggcgTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGcc                                                            >  4:131731/1‑148 (MQ=255)                                                                                       gTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAAtgtg                                                      <  4:153213/149‑1 (MQ=255)                                                                                        tGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGc                                                     <  5:1943/149‑1 (MQ=255)                                                                                          aCGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGtgtt                                                                                                         <  8:234637/95‑1 (MQ=255)                                                                                          aCGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGtgtt                                                                                                         >  7:234637/1‑95 (MQ=255)                                                                                            gctgctACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAggg                                                                                                  <  1:301672/100‑1 (MQ=255)                                                                                            gctgctACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAggg                                                                                                  >  2:301672/1‑100 (MQ=255)                                                                                               gctACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGgtg                                                                                                           <  5:102184/88‑1 (MQ=255)                                                                                               gctACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGgtg                                                                                                           >  6:102184/1‑88 (MQ=255)                                                                                                  aCTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTggcg                                                >  5:57336/1‑144 (MQ=255)                                                                                                  aCTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTggcg                                                <  6:57336/144‑1 (MQ=255)                                                                                                      aTCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCTGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTg                                       >  5:25767/1‑149 (MQ=255)                                                                                                      aTCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTg                                       <  2:147438/149‑1 (MQ=255)                                                                                                       tCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTgc                                      <  8:252569/149‑1 (MQ=255)                                                                                                       tCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTgc                                      <  3:131731/149‑1 (MQ=255)                                                                                                       tCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTgc                                      <  2:295191/149‑1 (MQ=255)                                                                                                           aGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATcac                                                                                                                              >  8:78082/1‑58 (MQ=255)                                                                                                           aGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATcac                                                                                                                              <  7:78082/58‑1 (MQ=255)                                                                                                               cGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTgccctgggtgatcacgcccttgatcagtagcagcgtcacgccgctggggctgttggttgcgctgttcatcctgcacccgccgctggggcttgtcgccctgctagcgctgc                               <  7:189099‑M2/149‑111 (MQ=255)                                                                                                                     cacaTGGGCCGGCAGTTGGGCCACAGCCATTCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTAcc                          >  1:27577/1‑149 (MQ=255)                                                                                                                     cacaTGGGCCGGCAGTTGGGCCACAGCCA‑TCGTgcccatgtgctcacgcccttgatcagtagcagcgtcacgccgctggtgctgttggttgcgctgttcatcctgcacccgccgctggggcttgtcgccctgctagcgctgccggcgct                         <  1:256731‑M2/149‑117 (MQ=255)                                                                                                                       caTGGGCCGGCAGTTGGGCCACAGCCA‑TCGTgcccatgtgctcacgcccttgatcagtagcagcgtcacgccgctggtgctgttggttgcgctgttcatcctgcacccgccgctggggcttgtcgccctgctagcgctgccggc                            >  3:119998‑M2/1‑31 (MQ=255)                                                                                                                       caTGGGCCGGCAGTTGGGCCACAGCCA‑TCGTgcccatgtgctcacgcccttgatcagtagcagcgtcacgccgctggtgctgttggttgcgctgttcatcctgcacccgccgctggggcttgtcgccctgctagcgctgccggc                            <  4:119998‑M2/144‑114 (MQ=255)                                                                                                                           ggCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAgg                    <  4:156725/148‑1 (MQ=255)                                                                                                                                gCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCtt                 >  2:316563/1‑146 (MQ=255)                                                                                                                                gCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCtt                 <  1:316563/146‑1 (MQ=255)                                                                                                                                    ttGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCgg          >  4:223154/1‑149 (MQ=255)                                                                                                                                        gCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCtt      >  4:126041/1‑149 (MQ=255)                                                                                                                                            caGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTcc  <  3:126041/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                            CTGCAGCCAGCGCCGGCAGCGCTAGCAGGGCGACAAGCCCCAGCGGCGGGTGCAGGATGAACAGCGCAACCAACAGCACCAGCGGCGTGACGCTGCTACTGATCA‑AGGGCGTGAGCACATGGGCCGGCAGTTGGGCCACAGCCA‑TCGTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCC  >  NC_002947/2966122‑2966408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.