| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3050490 | 37 (0.670) | 4 (0.080) | 4/246 | NT | 9.9% | coding (322/1164 nt) | PP_2663 | hypothetical protein |
| ? | NC_002947 | = 3050517 | 37 (0.700) | coding (349/1164 nt) | PP_2663 | hypothetical protein | |||||
GGACTTTGGCGGCATACGCCTGGTCGGCTGCACCAGCGCCGGTGAAATCACCCCGCTGGGCTACGGCCGCAATTGCGTGACGGCGGTCGGCTTCGATCACCGGCACTTTTCGATCGCCACCGCGTTGATCGATGAAATGGAGCGCTTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3050339‑3050490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccGCTCGACCATCTGCTGCGCGTCGATCAGGCTGAAGCGCTCCATTTCATCGATCAACGCGGTGGCGATCGAAAAGTGCCGGTGATCGAAGCCGACCGCCGTCACGCAATTGCGGCCGTAGCCCAGCGGGGTGATTTCACCGGCGCTGGT < NC_002947/3050517‑3050370 GGACTTTGGCGGCATACGCCTGGTCGGCTGCACCAGCGCCGGTGAAATCACCCCGCTGGGCTACGGCCGCAATTGCGTGACGGCGGTCGGCTTCGATCACCGGCACTTTTCGATCGCCACCGCGTTGATCGATGAAATGGAGCGCTTCA < 1:256937/149‑1 ACTTTGGCGGCATACGCCTGGTCGGCTGCACCAGCGCCGGTGAAATCACCCCGCTGGGCTACGGCCGCAATTGCGTGACGGCGGTCGGCTTCGATCACCGGCACTTTTCGATCGCCACCGCGTTGATCGATGAAATGGAGCGCTTCAGC < 8:119511/149‑1 CTTTGGCGGCATACGCCTGGTCGGCTGCACCAGCGCCGGTGAAATCACCCCGCTGGGCTACGGCCGCAATTGCGTGACGGCGGTCGGCTTCGATCACCGGCACTTTTCGATCGCCACCGCGTTGATCGATGAAATGGAGCGCTTCAGCC > 4:64488/1‑149 CACCAGCGCCGGTGAAATCACCCCGCTGGGCTACGGCCGCAATTGCGTGACGGCGGTCGGCTTCGATCACCGGCACTTTTCGATCGCCACCGCGTTGATCGATGAAATGGAGCGCTTCAGCCGCTCGACCATCTGCTGCGCGTCGAT > 5:33869/1‑147 CCGGTGAAATCACCCCGCTGGGCTACGGCCGCAATTGCGTGACGGCGGTCGGCTTCGATCACCGGCACTTTTCGATCGCCACCGCGTTGATCGATGAAATGGAGCGCTTCAGCCGCTCGACCATCTGCTGCGCGTCGATCAGGTTGAAG < 6:33869/149‑1 GGTGAAATCACCCCGCTGGGCTACGGCCGCAATTGCGTGACGGCGGTCGGCTTCGATCACCGGCACTTTTCGATCGCCACCGCGTTGATCGATGAAATGGAGCGCTTCAGCCGCTCGACCATCTGCTGCGCGTCGATCAGG > 1:151575/1‑141 GGTGAAATCACCCCGCTGGGCTACGGCCGCAATTGCGTGACGGCGGTCGGCTTCGATCACCGGCACTTTTCGATCGCCACCGCGTTGATCGATGAAATGGAGCGCTTCAGCCGCTCGACCATCTGCTGCGCGTCGATCAGG < 2:151575/141‑1 GCCGCTCGACCATCTGCTGCGCGTCGATCAGGCTGAAGCGCTCCATTTCATCGATCAACGCGGTGGCGATCGAAAAGTGCCGGTGATCGAAGCCGACCGCCGTCACGCAATTGCGGCCGTAGCCCAGCGGGGTGATTTCACCGGCGCTG < 8:115361/149‑1 GCCGCTCGACCATCTGCTGCGCGTCGATCAGGCTGAAGCGCTCCATTTCATCGATCAACGCGGTGGCGATCGAAAAGTGCCGGTGAT > 3:264625/1‑87 GCCGCTCGACCATCTGCTGCGCGTCGATCAGGCTGAAGCGCTCCATTTCATCGATCAACGCGGTGGCGATCGAAAAGTGCCGGTGAT < 4:264625/87‑1 CGCTCGACCATCTGCTGCGCGTCGATCAGGCTGAAGCGCTCCATTTCATCGATCAACGCGGTGGCGATCGAAAAGTGCCGGTGATCGAAGCCGACCGCCGTCACGCAATTGCGGCCGTAGCCCAGCGGGGTGATTTCACCGGCGCTGGT < 2:111187/149‑1 GGACTTTGGCGGCATACGCCTGGTCGGCTGCACCAGCGCCGGTGAAATCACCCCGCTGGGCTACGGCCGCAATTGCGTGACGGCGGTCGGCTTCGATCACCGGCACTTTTCGATCGCCACCGCGTTGATCGATGAAATGGAGCGCTTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3050339‑3050490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccGCTCGACCATCTGCTGCGCGTCGATCAGGCTGAAGCGCTCCATTTCATCGATCAACGCGGTGGCGATCGAAAAGTGCCGGTGATCGAAGCCGACCGCCGTCACGCAATTGCGGCCGTAGCCCAGCGGGGTGATTTCACCGGCGCTGGT < NC_002947/3050517‑3050370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |